PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000367941	[[132767005, 132781989], [132785131, 132785214], [132789541, 132789614], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824727], [132834145, 132834201]]	[[132781896, 132781989], [132785131, 132785214], [132789541, 132789614], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824669]]
ENST00000367937	[[132782852, 132782999], [132785131, 132785214], [132789541, 132789614], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824727], [132834145, 132834337]]	[[132782972, 132782999], [132785131, 132785214], [132789541, 132789614], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824669]]
ENST00000448348	[[132791132, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824653], [132834196, 132834274]]	None
ENST00000475879	[[132796418, 132796801], [132824584, 132824727], [132834145, 132834204]]	None
NM_001326578	[[132778662, 132781989], [132785131, 132785214], [132789541, 132789614], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824727], [132833665, 132833934]]	[[132781896, 132781989], [132785131, 132785214], [132789541, 132789614], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824669]]
NM_003569	[[132778662, 132781989], [132785131, 132785214], [132789541, 132789614], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824727], [132834145, 132834337]]	[[132781896, 132781989], [132785131, 132785214], [132789541, 132789614], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824669]]
NR_137169	[[132778662, 132781989], [132785131, 132785214], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824727], [132834145, 132834337]]	None
NM_001326579	[[132778662, 132781989], [132785131, 132785214], [132789541, 132789614], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824727], [132834555, 132834611]]	[[132781896, 132781989], [132785131, 132785214], [132789541, 132789614], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824669]]
NM_001326580	[[132782612, 132782999], [132785131, 132785214], [132789541, 132789614], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824727], [132834145, 132834337]]	[[132782972, 132782999], [132785131, 132785214], [132789541, 132789614], [132791089, 132791186], [132791712, 132791765], [132792601, 132792739], [132793420, 132793514], [132796731, 132796801], [132824584, 132824669]]

Promoter

Chrom	Start	End	Description
chr6	132834184	132834263	CAGE_peak_1_at_STX7_5end
chr6	132834443	132834454	CAGE_peak_6_at_STX7_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I132746	132746142	132746474	0.59	[{'connected_gene': 'VNN2', 'score': 89.09}, {'connected_gene': 'STX7', 'score': 5.63}, {'connected_gene': 'SLC18B1', 'score': 4.59}, {'connected_gene': 'ENSG00000234484', 'score': 0.44}, {'connected_gene': 'VNN3', 'score': 0.39}]
chr6	GH06I132755	132755401	132759400	1.68	[{'connected_gene': 'VNN2', 'score': 613.86}, {'connected_gene': 'ENSG00000234484', 'score': 24.06}, {'connected_gene': 'VNN3', 'score': 17.77}, {'connected_gene': 'STX7', 'score': 5.81}, {'connected_gene': 'SLC18B1', 'score': 4.74}]
chr6	GH06I132748	132748532	132749800	1.24	[{'connected_gene': 'VNN2', 'score': 78.42}, {'connected_gene': 'VNN3', 'score': 16.87}, {'connected_gene': 'STX7', 'score': 6.18}, {'connected_gene': 'SLC18B1', 'score': 4.81}, {'connected_gene': 'ENSG00000234484', 'score': 0.77}]
chr6	GH06I132510	132510540	132514972	2.55	[{'connected_gene': 'STX7', 'score': 563.72}, {'connected_gene': 'MED23', 'score': 19.19}, {'connected_gene': 'SNORA33', 'score': 12.24}, {'connected_gene': 'LOC100421775', 'score': 10.25}, {'connected_gene': 'ENPP1', 'score': 9.86}, {'connected_gene': 'VNN2', 'score': 9.56}, {'connected_gene': 'VNN1', 'score': 2.74}, {'connected_gene': 'MOXD1', 'score': 0.14}]
chr6	GH06I132489	132489385	132492321	1.11	[{'connected_gene': 'STX7', 'score': 20.13}, {'connected_gene': 'MOXD1', 'score': 11.1}, {'connected_gene': 'VNN1', 'score': 2.72}, {'connected_gene': 'TAAR6', 'score': 1.61}, {'connected_gene': 'VNN2', 'score': 1.61}, {'connected_gene': 'TAAR5', 'score': 1.37}, {'connected_gene': 'SLC18B1', 'score': 1.27}]
chr6	GH06I132470	132470881	132473338	0.2	[{'connected_gene': 'STX7', 'score': 0.26}, {'connected_gene': 'MOXD1', 'score': 0.19}]
chr6	GH06I132504	132504882	132505031	0.69	[{'connected_gene': 'STX7', 'score': 7.03}, {'connected_gene': 'MOXD1', 'score': 0.15}]
chr6	GH06I132484	132484262	132484451	0.82	[{'connected_gene': 'STX7', 'score': 11.6}, {'connected_gene': 'MOXD1', 'score': 0.18}]
chr6	GH06I132465	132465502	132465709	0.4	[{'connected_gene': 'STX7', 'score': 10.53}, {'connected_gene': 'MOXD1', 'score': 0.21}]
chr6	GH06I132487	132487596	132488869	0.54	[{'connected_gene': 'STX7', 'score': 12.83}, {'connected_gene': 'MOXD1', 'score': 11.1}]
chr6	GH06I132736	132736200	132736532	0.91	[{'connected_gene': 'VNN3', 'score': 573.65}, {'connected_gene': 'VNN2', 'score': 4.28}, {'connected_gene': 'VNN1', 'score': 3.78}, {'connected_gene': 'STX7', 'score': 1.66}, {'connected_gene': 'ENSG00000234484', 'score': 0.37}]
chr6	GH06I132493	132493608	132501188	1.2	[{'connected_gene': 'MOXD1', 'score': 11.08}, {'connected_gene': 'STX7', 'score': 9.48}, {'connected_gene': 'ENPP1', 'score': 4.35}]
chr6	GH06I132444	132444446	132446790	0.52	[{'connected_gene': 'MOXD1', 'score': 11.76}, {'connected_gene': 'STX7', 'score': 8.07}]
chr6	GH06I132390	132390724	132394117	0.69	[{'connected_gene': 'MOXD1', 'score': 6.77}, {'connected_gene': 'STX7', 'score': 4.49}, {'connected_gene': 'PIR45153', 'score': 0.28}]