PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000329713	[[82334118, 82336954], [82337790, 82338482]]	[[82335500, 82336954], [82337790, 82338046]]
ENST00000558133	[[82334127, 82338460]]	[[82337569, 82338046]]
NM_032246	[[82334118, 82336954], [82337790, 82338484]]	[[82335500, 82336954], [82337790, 82338046]]

Promoter

Chrom	Start	End	Description
chr15	82336075	82336082	CAGE_peak_2_at_MEX3B_5end
chr15	82336248	82336272	CAGE_peak_7_at_MEX3B_5end
chr15	82336577	82336584	CAGE_peak_14_at_MEX3B_5end
chr15	82336770	82336786	CAGE_peak_11_at_MEX3B_5end
chr15	82336795	82336817	CAGE_peak_5_at_MEX3B_5end
chr15	82336825	82336845	CAGE_peak_6_at_MEX3B_5end
chr15	82336881	82336891	CAGE_peak_8_at_MEX3B_5end
chr15	82338341	82338379	CAGE_peak_1_at_MEX3B_5end
chr15	82338482	82338496	CAGE_peak_3_at_MEX3B_5end
chr15	82338500	82338513	CAGE_peak_4_at_MEX3B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I082041	82041821	82042582	0.4	[{'connected_gene': 'MEX3B', 'score': 0.77}, {'connected_gene': 'LOC105370923', 'score': 0.39}]
chr15	GH15I081947	81947602	81948081	0.65	[{'connected_gene': 'MEX3B', 'score': 11.4}, {'connected_gene': 'GC15P081965', 'score': 0.37}, {'connected_gene': 'LOC102724001', 'score': 0.37}, {'connected_gene': 'GC15P081908', 'score': 0.26}]
chr15	GH15I081940	81940880	81940887	0.8	[{'connected_gene': 'MEX3B', 'score': 11.72}, {'connected_gene': 'GC15P081965', 'score': 0.34}, {'connected_gene': 'LOC102724001', 'score': 0.31}, {'connected_gene': 'GC15P081908', 'score': 0.29}]
chr15	GH15I081943	81941140	81941269	0.56	[{'connected_gene': 'MEX3B', 'score': 11.72}, {'connected_gene': 'GC15P081965', 'score': 0.34}, {'connected_gene': 'LOC102724001', 'score': 0.31}, {'connected_gene': 'GC15P081908', 'score': 0.29}]
chr15	GH15I081941	81940364	81940743	0.82	[{'connected_gene': 'MEX3B', 'score': 11.72}, {'connected_gene': 'GC15P081965', 'score': 0.34}, {'connected_gene': 'LOC102724001', 'score': 0.31}, {'connected_gene': 'GC15P081908', 'score': 0.29}]
chr15	GH15I081948	81948388	81948569	0.49	[{'connected_gene': 'MEX3B', 'score': 11.4}, {'connected_gene': 'GC15P081965', 'score': 0.37}, {'connected_gene': 'LOC102724001', 'score': 0.37}, {'connected_gene': 'GC15P081908', 'score': 0.26}]
chr15	GH15I081944	81944658	81945574	0.91	[{'connected_gene': 'MEX3B', 'score': 11.72}, {'connected_gene': 'GC15P081965', 'score': 0.34}, {'connected_gene': 'LOC102724001', 'score': 0.34}, {'connected_gene': 'GC15P081908', 'score': 0.28}]
chr15	GH15I082081	82081980	82083206	0.82	[{'connected_gene': 'MEX3B', 'score': 5.91}, {'connected_gene': 'LINC01583', 'score': 0.44}]
chr15	GH15I082063	82063180	82063386	0.38	[{'connected_gene': 'MEX3B', 'score': 0.37}, {'connected_gene': 'LINC01583', 'score': 0.31}]
chr15	GH15I082067	82067640	82067789	0.68	[{'connected_gene': 'MEX3B', 'score': 0.34}, {'connected_gene': 'LINC01583', 'score': 0.34}]
chr15	GH15I082043	82043199	82048943	2.33	[{'connected_gene': 'MEX3B', 'score': 559.46}, {'connected_gene': 'SNHG21', 'score': 12.66}, {'connected_gene': 'ENSG00000259445', 'score': 5.33}, {'connected_gene': 'LOC105370923', 'score': 0.37}]
chr15	GH15I081951	81951020	81951169	0.94	[{'connected_gene': 'MEX3B', 'score': 11.4}, {'connected_gene': 'ENSG00000259442', 'score': 11.39}, {'connected_gene': 'SNHG21', 'score': 11.04}, {'connected_gene': 'GC15P081965', 'score': 0.39}, {'connected_gene': 'LOC102724001', 'score': 0.37}, {'connected_gene': 'GC15P081908', 'score': 0.26}]
chr15	GH15I082127	82127876	82131548	1.11	[{'connected_gene': 'SAXO2', 'score': 9.74}, {'connected_gene': 'EFL1', 'score': 8.27}, {'connected_gene': 'CSPG4P10', 'score': 7.78}, {'connected_gene': 'MEX3B', 'score': 7.48}, {'connected_gene': 'GOLGA6L9', 'score': 6.67}, {'connected_gene': 'GOLGA2P10', 'score': 6.41}, {'connected_gene': 'AP3B2', 'score': 5.81}, {'connected_gene': 'GC15P082150', 'score': 0.34}, {'connected_gene': 'GC15P082104', 'score': 0.31}]
chr15	GH15I081942	81942300	81942449	0.87	[{'connected_gene': 'WHAMM', 'score': 12.37}, {'connected_gene': 'GOLGA6L9', 'score': 11.96}, {'connected_gene': 'MEX3B', 'score': 11.72}, {'connected_gene': 'RPL9P9', 'score': 10.71}, {'connected_gene': 'GC15P081965', 'score': 0.34}, {'connected_gene': 'LOC102724001', 'score': 0.34}, {'connected_gene': 'GC15P081908', 'score': 0.28}]
chr15	GH15I082010	82010618	82010904	0.23	[{'connected_gene': 'LOC100288241', 'score': 550.77}, {'connected_gene': 'ENSG00000259622', 'score': 550.77}, {'connected_gene': 'MEX3B', 'score': 11.77}, {'connected_gene': 'LOC105370922', 'score': 0.77}]
chr15	GH15I082057	82057880	82058441	0.43	[{'connected_gene': 'ENSG00000259692', 'score': 4.47}, {'connected_gene': 'MEX3B', 'score': 0.39}, {'connected_gene': 'LINC01583', 'score': 0.29}]