PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000302692	[[9599540, 9599806], [9613683, 9613863], [9627341, 9627419], [9630315, 9630416], [9633403, 9633470], [9640011, 9640292], [9642356, 9645237]]	[[9599750, 9599806], [9613683, 9613863], [9627341, 9627419], [9630315, 9630416], [9633403, 9633470], [9640011, 9640292], [9642356, 9642559]]
NM_032315	[[9599527, 9599806], [9613683, 9613863], [9627341, 9627419], [9630315, 9630416], [9633403, 9633470], [9640011, 9640292], [9642356, 9642831]]	[[9599750, 9599806], [9613683, 9613863], [9627341, 9627419], [9630315, 9630416], [9633403, 9633470], [9640011, 9640292], [9642356, 9642559]]

Promoter

Chrom	Start	End	Description
chr1	9599490	9599529	CAGE_peak_1_at_SLC25A33_5end
chr1	9599540	9599560	CAGE_peak_2_at_SLC25A33_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I009542	9542027	9542783	0.74	[{'connected_gene': 'SLC25A33', 'score': 0.77}, {'connected_gene': 'RPL9P11', 'score': 0.29}]
chr1	GH01I009537	9537173	9541691	2.09	[{'connected_gene': 'SLC25A33', 'score': 550.77}, {'connected_gene': 'TMEM201', 'score': 6.31}, {'connected_gene': 'ENSG00000235263', 'score': 0.28}]
chr1	GH01I009274	9274996	9276331	1.54	[{'connected_gene': 'SPSB1', 'score': 9.25}, {'connected_gene': 'H6PD', 'score': 6.64}, {'connected_gene': 'SLC25A33', 'score': 1.23}, {'connected_gene': 'PIR55180', 'score': 0.44}]
chr1	GH01I009135	9135427	9135728	0.66	[{'connected_gene': 'GPR157', 'score': 4.79}, {'connected_gene': 'SLC25A33', 'score': 1.48}, {'connected_gene': 'MIR34A', 'score': 0.37}]
chr1	GH01I009559	9559336	9560221	0.57	[{'connected_gene': 'RPL9P11', 'score': 0.37}, {'connected_gene': 'SLC25A33', 'score': 0.34}]
chr1	GH01I009530	9530952	9531805	0.57	[{'connected_gene': 'MIR34A', 'score': 9.9}, {'connected_gene': 'GPR157', 'score': 9.73}, {'connected_gene': 'SLC25A33', 'score': 0.44}, {'connected_gene': 'ENSG00000235263', 'score': 0.31}]
chr1	GH01I009532	9532482	9533687	0.71	[{'connected_gene': 'MIR34A', 'score': 9.9}, {'connected_gene': 'GPR157', 'score': 9.73}, {'connected_gene': 'SLC25A33', 'score': 0.44}, {'connected_gene': 'ENSG00000235263', 'score': 0.31}]
chr1	GH01I009625	9625746	9631800	1.78	[{'connected_gene': 'PIK3CD', 'score': 567.21}, {'connected_gene': 'LOC105376712', 'score': 550.77}, {'connected_gene': 'SLC25A33', 'score': 11.31}, {'connected_gene': 'TMEM201', 'score': 5.88}]
chr1	GH01I009555	9555297	9556193	0.75	[{'connected_gene': 'TMEM201', 'score': 11.88}, {'connected_gene': 'SLC25A33', 'score': 0.37}, {'connected_gene': 'RPL9P11', 'score': 0.34}]
chr1	GH01I009561	9561063	9562236	1.03	[{'connected_gene': 'DFFA', 'score': 12.35}, {'connected_gene': 'LINC01759', 'score': 10.98}, {'connected_gene': 'GPR157', 'score': 10.05}, {'connected_gene': 'TMEM201', 'score': 5.35}, {'connected_gene': 'RPL9P11', 'score': 0.39}, {'connected_gene': 'SLC25A33', 'score': 0.34}]