PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000371687	[[92979907, 92980084], [92982445, 92982740], [92987093, 92987131]]	[[92982628, 92982740], [92987093, 92987131]]
ENST00000543648	[[92979907, 92980084], [92982445, 92982740], [93000240, 93000337], [93008261, 93008317], [93008421, 93008481], [93011048, 93011197], [93021082, 93021181], [93024187, 93024277], [93031394, 93031454], [93038025, 93038341]]	[[92982628, 92982740], [93000240, 93000337], [93008261, 93008317], [93008421, 93008481], [93011048, 93011197], [93021082, 93021181], [93024187, 93024277], [93031394, 93031454], [93038025, 93038073]]
ENST00000496708	[[92979933, 92980037], [92980127, 92980593], [92982445, 92982686]]	None
ENST00000490164	[[92980539, 92980593], [92982445, 92982740], [92987093, 92987717]]	None
ENST00000336126	[[92980544, 92980593], [92982445, 92982740], [93000240, 93000337], [93008261, 93008317], [93008421, 93008481], [93011048, 93011197], [93021082, 93021181], [93024187, 93024277], [93031394, 93031454], [93038025, 93044088]]	[[92982628, 92982740], [93000240, 93000337], [93008261, 93008317], [93008421, 93008481], [93011048, 93011197], [93021082, 93021181], [93024187, 93024277], [93031394, 93031454], [93038025, 93038073]]
NR_046435	[[92922768, 92922838], [92982445, 92982740], [92987093, 92987717]]	None
NM_001257101	[[92922768, 92922838], [92982445, 92982740], [93000240, 93000337], [93008261, 93008317], [93008421, 93008481], [93011048, 93011197], [93021082, 93021181], [93024187, 93024277], [93031394, 93031454], [93038025, 93044088]]	[[92982628, 92982740], [93000240, 93000337], [93008261, 93008317], [93008421, 93008481], [93011048, 93011197], [93021082, 93021181], [93024187, 93024277], [93031394, 93031454], [93038025, 93038073]]
NM_001256549	[[92979907, 92980084], [92982445, 92982740], [93000240, 93000337], [93008261, 93008317], [93008421, 93008481], [93011048, 93011197], [93021082, 93021181], [93024187, 93024277], [93031394, 93031454], [93038025, 93044088]]	[[92982628, 92982740], [93000240, 93000337], [93008261, 93008317], [93008421, 93008481], [93011048, 93011197], [93021082, 93021181], [93024187, 93024277], [93031394, 93031454], [93038025, 93038073]]
NR_046310	[[92980358, 92980593], [92982445, 92982740], [92987093, 92987717]]	None
NM_032373	[[92980358, 92980593], [92982445, 92982740], [93000240, 93000337], [93008261, 93008317], [93008421, 93008481], [93011048, 93011197], [93021082, 93021181], [93024187, 93024277], [93031394, 93031454], [93038025, 93044088]]	[[92982628, 92982740], [93000240, 93000337], [93008261, 93008317], [93008421, 93008481], [93011048, 93011197], [93021082, 93021181], [93024187, 93024277], [93031394, 93031454], [93038025, 93038073]]

Promoter

Chrom	Start	End	Description
chr10	92922581	92922624	CAGE_peak_5_at_PCGF5_5end
chr10	92922625	92922667	CAGE_peak_6_at_PCGF5_5end
chr10	92922717	92922835	CAGE_peak_1_at_PCGF5_5end
chr10	92980343	92980348	CAGE_peak_17_at_PCGF5_5end
chr10	92980351	92980360	CAGE_peak_9_at_PCGF5_5end
chr10	92980361	92980398	CAGE_peak_4_at_PCGF5_5end
chr10	92980399	92980458	CAGE_peak_2_at_PCGF5_5end
chr10	92980468	92980485	CAGE_peak_7_at_PCGF5_5end
chr10	92980517	92980550	CAGE_peak_3_at_PCGF5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I091161	91161684	91165406	2.2	[{'connected_gene': 'PCGF5', 'score': 550.77}, {'connected_gene': 'BTAF1', 'score': 15.59}, {'connected_gene': 'TNKS2', 'score': 12.41}, {'connected_gene': 'NUDT9P1', 'score': 6.74}, {'connected_gene': 'HECTD2', 'score': 1.83}, {'connected_gene': 'PIR60971', 'score': 0.28}]
chr10	GH10I091219	91219013	91222533	2.21	[{'connected_gene': 'PCGF5', 'score': 550.22}, {'connected_gene': 'BTAF1', 'score': 15.59}, {'connected_gene': 'TNKS2', 'score': 12.41}, {'connected_gene': 'PIR60971', 'score': 0.37}, {'connected_gene': 'GC10P091282', 'score': 0.21}]
chr10	GH10I091169	91169009	91169177	0.23	[{'connected_gene': 'PCGF5', 'score': 0.44}, {'connected_gene': 'PIR60971', 'score': 0.29}]
chr10	GH10I091206	91206533	91206913	0.59	[{'connected_gene': 'NUDT9P1', 'score': 7.03}, {'connected_gene': 'PIR60971', 'score': 0.44}, {'connected_gene': 'PCGF5', 'score': 0.26}, {'connected_gene': 'GC10P091282', 'score': 0.18}]
chr10	GH10I091214	91214365	91214468	0.22	[{'connected_gene': 'PIR60971', 'score': 0.39}, {'connected_gene': 'PCGF5', 'score': 0.23}, {'connected_gene': 'GC10P091282', 'score': 0.2}]
chr10	GH10I091189	91189926	91191871	0.8	[{'connected_gene': 'PIR60971', 'score': 0.39}, {'connected_gene': 'PCGF5', 'score': 0.31}]
chr10	GH10I091184	91184802	91185803	0.63	[{'connected_gene': 'PIR60971', 'score': 0.37}, {'connected_gene': 'PCGF5', 'score': 0.34}]
chr10	GH10I091223	91223401	91224000	0.43	[{'connected_gene': 'PIR60971', 'score': 0.34}, {'connected_gene': 'GC10P091282', 'score': 0.22}, {'connected_gene': 'PCGF5', 'score': 0.21}]
chr10	GH10I091210	91210063	91211072	0.57	[{'connected_gene': 'PIR60971', 'score': 0.44}, {'connected_gene': 'PCGF5', 'score': 0.25}, {'connected_gene': 'GC10P091282', 'score': 0.19}]
chr10	GH10I091215	91215501	91215538	0.48	[{'connected_gene': 'PIR60971', 'score': 0.39}, {'connected_gene': 'PCGF5', 'score': 0.23}, {'connected_gene': 'GC10P091282', 'score': 0.2}]
chr10	GH10I091251	91251564	91251713	0.65	[{'connected_gene': 'GC10P091282', 'score': 0.29}, {'connected_gene': 'PIR60971', 'score': 0.25}, {'connected_gene': 'PCGF5', 'score': 0.17}]
chr10	GH10I091198	91197200	91197400	0.31	[{'connected_gene': 'PIR60971', 'score': 0.77}, {'connected_gene': 'PCGF5', 'score': 0.29}]
chr10	GH10I091197	91197918	91203285	1.02	[{'connected_gene': 'PIR60971', 'score': 550.77}, {'connected_gene': 'NUDT9P1', 'score': 7.15}, {'connected_gene': 'ANKRD1', 'score': 5.45}, {'connected_gene': 'PCGF5', 'score': 0.28}]