PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000366623	[[233463513, 233464579], [233482187, 233482368], [233489552, 233489701], [233490581, 233490757], [233497798, 233498039], [233507783, 233509880]]	[[233463774, 233464579], [233482187, 233482368], [233489552, 233489701], [233490581, 233490757], [233497798, 233498039], [233507783, 233507944]]
ENST00000366624	[[233463513, 233464579], [233482187, 233482368], [233489552, 233489701], [233490581, 233490757], [233497798, 233498039], [233507783, 233507906], [233511661, 233511812], [233512175, 233512273], [233514676, 233515456], [233518050, 233520894]]	[[233463774, 233464579], [233482187, 233482368], [233489552, 233489701], [233490581, 233490757], [233497798, 233498039], [233507783, 233507906], [233511661, 233511812], [233512175, 233512273], [233514676, 233515456], [233518050, 233518457]]
ENST00000366622	[[233511528, 233511812], [233512175, 233512273], [233514676, 233515456], [233518050, 233520893]]	[[233511648, 233511812], [233512175, 233512273], [233514676, 233515456], [233518050, 233518457]]
NM_032435	[[233463513, 233464579], [233482187, 233482368], [233489552, 233489701], [233490581, 233490757], [233497798, 233498039], [233507783, 233507906], [233511661, 233511812], [233512175, 233512273], [233514676, 233515456], [233518050, 233520894]]	[[233463774, 233464579], [233482187, 233482368], [233489552, 233489701], [233490581, 233490757], [233497798, 233498039], [233507783, 233507906], [233511661, 233511812], [233512175, 233512273], [233514676, 233515456], [233518050, 233518457]]

Promoter

Chrom	Start	End	Description
chr1	233463463	233463494	CAGE_peak_1_at_KIAA1804_5end
chr1	233463507	233463520	CAGE_peak_2_at_KIAA1804_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I232459	232459545	232460390	0.2	[{'connected_gene': 'MAP3K21', 'score': 4.78}, {'connected_gene': 'PIR51388', 'score': 0.25}, {'connected_gene': 'GC01P232625', 'score': 0.1}, {'connected_gene': 'SIPA1L2', 'score': 0.09}]
chr1	GH01I233366	233366775	233368904	0.69	[{'connected_gene': 'MAP3K21', 'score': 22.15}, {'connected_gene': 'GC01M233432', 'score': 0.21}]
chr1	GH01I233359	233359408	233359824	0.71	[{'connected_gene': 'MAP3K21', 'score': 13.29}, {'connected_gene': 'GC01M233432', 'score': 0.19}]
chr1	GH01I233326	233326734	233329588	1.94	[{'connected_gene': 'MAP3K21', 'score': 586.05}, {'connected_gene': 'GC01M233432', 'score': 0.15}]
chr1	GH01I233329	233329801	233330400	0.56	[{'connected_gene': 'MAP3K21', 'score': 40.94}, {'connected_gene': 'GC01M233432', 'score': 0.15}]
chr1	GH01I233288	233288473	233296344	2.16	[{'connected_gene': 'PCNX2', 'score': 560.63}, {'connected_gene': 'MAP3K21', 'score': 12.54}, {'connected_gene': 'NTPCR', 'score': 9.88}, {'connected_gene': 'RPS7P3', 'score': 6.47}, {'connected_gene': 'ENSG00000251508', 'score': 0.77}]