PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000394015	[[39221368, 39222131]]	[[39221710, 39222097]]
NM_033184	[[39221367, 39222131]]	[[39221710, 39222097]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I041338	41338033	41343989	0.96	[{'connected_gene': 'KRT38', 'score': 20.57}, {'connected_gene': 'KRTAP16-1', 'score': 10.63}, {'connected_gene': 'KRTAP29-1', 'score': 10.61}, {'connected_gene': 'KRT31', 'score': 10.3}, {'connected_gene': 'LOC100505782', 'score': 10.28}, {'connected_gene': 'KRTAP17-1', 'score': 10.24}, {'connected_gene': 'KRTAP9-6', 'score': 10.09}, {'connected_gene': 'KRT37', 'score': 10.04}, {'connected_gene': 'ENSG00000234477', 'score': 9.95}, {'connected_gene': 'KRT32', 'score': 9.84}, {'connected_gene': 'RNU2-32P', 'score': 9.84}, {'connected_gene': 'KRTAP1-1', 'score': 9.82}, {'connected_gene': 'KRTAP1-3', 'score': 9.82}, {'connected_gene': 'KRTAP1-4', 'score': 9.81}, {'connected_gene': 'KRT40', 'score': 9.42}, {'connected_gene': 'KRT20', 'score': 9.39}, {'connected_gene': 'KRTAP2-5P', 'score': 9.36}, {'connected_gene': 'KRTAP2-4', 'score': 9.36}, {'connected_gene': 'KRT23', 'score': 8.62}, {'connected_gene': 'KRT36', 'score': 6.02}, {'connected_gene': 'ENSG00000108516', 'score': 0.44}, {'connected_gene': 'KRT33A', 'score': 0.44}]
chr17	GH17I041065	41065601	41065800	0.2	[{'connected_gene': 'KRTAP2-4', 'score': 550.77}, {'connected_gene': 'KRTAP2-3', 'score': 0.44}, {'connected_gene': 'GC17M041060', 'score': 0.39}]
chr17	GH17I041066	41065816	41067666	1.35	[{'connected_gene': 'KRTAP2-4', 'score': 550.77}, {'connected_gene': 'KRTAP4-8', 'score': 7.98}, {'connected_gene': 'KRTAP4-6', 'score': 7.63}, {'connected_gene': 'GC17M041060', 'score': 0.44}, {'connected_gene': 'KRTAP2-5P', 'score': 0.44}]
chr17	GH17I041352	41352992	41353325	0.66	[{'connected_gene': 'KRTAP2-1', 'score': 12.89}, {'connected_gene': 'KRTAP9-1', 'score': 9.33}, {'connected_gene': 'KRTAP2-2', 'score': 9.26}, {'connected_gene': 'KRTAP9-2', 'score': 8.89}, {'connected_gene': 'KRTAP9-9', 'score': 8.32}, {'connected_gene': 'KRT37', 'score': 4.16}, {'connected_gene': 'KRT40', 'score': 2.89}, {'connected_gene': 'KRTAP2-4', 'score': 1.96}, {'connected_gene': 'KRT35', 'score': 1.57}, {'connected_gene': 'KRT38', 'score': 1.52}, {'connected_gene': 'KRT33A', 'score': 0.77}, {'connected_gene': 'KRT33B', 'score': 0.37}]
chr17	GH17I041058	41058207	41063886	1.75	[{'connected_gene': 'KRTAP2-3', 'score': 555.41}, {'connected_gene': 'KRTAP1-3', 'score': 11.81}, {'connected_gene': 'KRTAP1-4', 'score': 11.79}, {'connected_gene': 'KRTAP1-5', 'score': 11.08}, {'connected_gene': 'KRT38', 'score': 4.76}, {'connected_gene': 'KRT27', 'score': 4.31}, {'connected_gene': 'KRTAP2-4', 'score': 0.77}, {'connected_gene': 'GC17M041060', 'score': 0.39}]
chr17	GH17I041557	41557145	41557543	0.22	[{'connected_gene': 'GC17M041544', 'score': 550.77}, {'connected_gene': 'KRTAP9-2', 'score': 21.61}, {'connected_gene': 'KRTAP9-1', 'score': 12.68}, {'connected_gene': 'KRTAP9-9', 'score': 11.79}, {'connected_gene': 'KRT16', 'score': 7.03}, {'connected_gene': 'KRT37', 'score': 4.05}, {'connected_gene': 'KRTAP2-4', 'score': 2.3}, {'connected_gene': 'KRT38', 'score': 2.26}, {'connected_gene': 'KRT35', 'score': 1.97}, {'connected_gene': 'KRT9', 'score': 0.39}]
chr17	GH17I041499	41499613	41500932	1.52	[{'connected_gene': 'ENSG00000229732', 'score': 550.77}, {'connected_gene': 'KRTAP2-1', 'score': 7.15}, {'connected_gene': 'KRTAP9-2', 'score': 5.39}, {'connected_gene': 'KRT38', 'score': 5.38}, {'connected_gene': 'KRTAP2-2', 'score': 5.25}, {'connected_gene': 'KRTAP9-1', 'score': 5.17}, {'connected_gene': 'KRTAP9-9', 'score': 4.78}, {'connected_gene': 'KRT34', 'score': 4.16}, {'connected_gene': 'KRT37', 'score': 2.64}, {'connected_gene': 'KRTAP2-4', 'score': 1.58}, {'connected_gene': 'KRT36', 'score': 0.44}]
chr17	GH17I041336	41336169	41336318	0.31	[{'connected_gene': 'ENSG00000108516', 'score': 550.77}, {'connected_gene': 'KRTAP29-1', 'score': 10.48}, {'connected_gene': 'KRTAP16-1', 'score': 10.37}, {'connected_gene': 'KRTAP17-1', 'score': 10.27}, {'connected_gene': 'KRTAP9-6', 'score': 10.1}, {'connected_gene': 'KRT31', 'score': 10.04}, {'connected_gene': 'KRT37', 'score': 10.03}, {'connected_gene': 'LOC100505782', 'score': 10.03}, {'connected_gene': 'ENSG00000234477', 'score': 9.95}, {'connected_gene': 'KRT32', 'score': 9.83}, {'connected_gene': 'RNU2-32P', 'score': 9.83}, {'connected_gene': 'KRTAP1-1', 'score': 9.82}, {'connected_gene': 'KRTAP1-4', 'score': 9.82}, {'connected_gene': 'KRTAP1-3', 'score': 9.81}, {'connected_gene': 'KRT40', 'score': 9.42}, {'connected_gene': 'KRTAP2-5P', 'score': 9.37}, {'connected_gene': 'KRTAP2-4', 'score': 9.36}, {'connected_gene': 'KRT33A', 'score': 0.39}]