PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000267294	[[100615217, 100618073], [100622380, 100624163]]	[[100617630, 100618073], [100622380, 100623929]]
NM_033132	[[100615274, 100618073], [100622380, 100624178]]	[[100617630, 100618073], [100622380, 100623929]]

Promoter

Chrom	Start	End	Description
chr13	100623360	100623373	CAGE_peak_2_at_ZIC5_5end
chr13	100623375	100623425	CAGE_peak_1_at_ZIC5_5end
chr13	100623731	100623747	CAGE_peak_8_at_ZIC5_5end
chr13	100623775	100623780	CAGE_peak_12_at_ZIC5_5end
chr13	100623993	100624011	CAGE_peak_4_at_ZIC5_5end
chr13	100624012	100624026	CAGE_peak_3_at_ZIC5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I099963	99960022	99960212	0.66	[{'connected_gene': 'ZIC5', 'score': 5.29}, {'connected_gene': 'ZIC2', 'score': 1.72}, {'connected_gene': 'LOC101927437', 'score': 0.77}, {'connected_gene': 'GC13M099970', 'score': 0.44}, {'connected_gene': 'PIR56949', 'score': 0.44}]
chr13	GH13I099948	99948681	99951251	0.67	[{'connected_gene': 'ZIC5', 'score': 12.67}, {'connected_gene': 'ZIC2', 'score': 12.63}, {'connected_gene': 'LOC101927437', 'score': 0.44}, {'connected_gene': 'GC13P099922', 'score': 0.31}]
chr13	GH13I099665	99665790	99666035	0.42	[{'connected_gene': 'ZIC5', 'score': 10.73}, {'connected_gene': 'ZIC2', 'score': 1.46}, {'connected_gene': 'GC13P099679', 'score': 0.39}, {'connected_gene': 'MIR4306', 'score': 0.34}, {'connected_gene': 'CLYBL', 'score': 0.22}]
chr13	GH13I099973	99973907	99975753	1.2	[{'connected_gene': 'ZIC5', 'score': 0.77}, {'connected_gene': 'ZIC2', 'score': 0.44}]
chr13	GH13I099974	99973627	99973776	0.83	[{'connected_gene': 'ZIC5', 'score': 550.77}, {'connected_gene': 'ZIC2', 'score': 0.44}]
chr13	GH13I099972	99972467	99972636	0.58	[{'connected_gene': 'ZIC5', 'score': 550.77}, {'connected_gene': 'ZIC2', 'score': 0.44}]
chr13	GH13I099967	99967509	99972436	1.88	[{'connected_gene': 'ZIC5', 'score': 552.87}, {'connected_gene': 'GC13M099970', 'score': 550.77}, {'connected_gene': 'PIR56949', 'score': 550.77}, {'connected_gene': 'ZIC2', 'score': 2.2}]
chr13	GH13I099990	99990127	99990923	1.27	[{'connected_gene': 'ZIC5', 'score': 32.06}, {'connected_gene': 'ZIC2', 'score': 11.07}, {'connected_gene': 'GC13P099996', 'score': 0.44}]
chr13	GH13I099655	99655225	99660569	1.51	[{'connected_gene': 'ZIC5', 'score': 24.93}, {'connected_gene': 'CLYBL', 'score': 9.89}, {'connected_gene': 'ZIC2', 'score': 7.19}, {'connected_gene': 'LINC00449', 'score': 4.67}, {'connected_gene': 'MIR4306', 'score': 0.39}, {'connected_gene': 'GC13P099679', 'score': 0.34}]
chr13	GH13I099978	99978110	99988923	2.62	[{'connected_gene': 'ZIC2', 'score': 557.0}, {'connected_gene': 'ZIC5', 'score': 29.85}, {'connected_gene': 'UBAC2', 'score': 10.97}, {'connected_gene': 'GC13P099996', 'score': 0.39}]
chr13	GH13I099991	99991847	99994022	1.17	[{'connected_gene': 'ZIC2', 'score': 10.98}, {'connected_gene': 'ZIC5', 'score': 5.07}, {'connected_gene': 'GC13P099996', 'score': 0.77}]
chr13	GH13I099955	99955737	99956026	0.7	[{'connected_gene': 'LOC101927437', 'score': 550.77}, {'connected_gene': 'ZIC5', 'score': 28.79}, {'connected_gene': 'ZIC2', 'score': 6.48}, {'connected_gene': 'PCCA', 'score': 1.22}, {'connected_gene': 'GC13P099922', 'score': 0.29}]
chr13	GH13I099958	99958807	99959236	0.95	[{'connected_gene': 'LOC101927437', 'score': 550.77}, {'connected_gene': 'ZIC5', 'score': 42.03}, {'connected_gene': 'ZIC2', 'score': 3.89}, {'connected_gene': 'GC13M099970', 'score': 0.39}, {'connected_gene': 'PIR56949', 'score': 0.39}]
chr13	GH13I099997	99995667	99995816	0.72	[{'connected_gene': 'GC13P099996', 'score': 550.77}, {'connected_gene': 'ZIC5', 'score': 13.58}, {'connected_gene': 'LINC00554', 'score': 0.77}, {'connected_gene': 'ZIC2', 'score': 0.39}]
chr13	GH13I099999	99995507	99995656	0.69	[{'connected_gene': 'GC13P099996', 'score': 550.77}, {'connected_gene': 'ZIC5', 'score': 13.58}, {'connected_gene': 'LINC00554', 'score': 0.77}, {'connected_gene': 'ZIC2', 'score': 0.39}]
chr13	GH13I099998	99996227	99996436	0.63	[{'connected_gene': 'GC13P099996', 'score': 550.77}, {'connected_gene': 'LINC00554', 'score': 550.77}, {'connected_gene': 'ZIC5', 'score': 13.58}, {'connected_gene': 'ZIC2', 'score': 0.39}]
chr13	GH13I099995	99995827	99996036	0.74	[{'connected_gene': 'GC13P099996', 'score': 550.77}, {'connected_gene': 'LINC00554', 'score': 550.77}, {'connected_gene': 'ZIC5', 'score': 13.58}, {'connected_gene': 'ZIC2', 'score': 0.39}]
chr13	GH13I099996	99996847	99998004	0.66	[{'connected_gene': 'GC13P099996', 'score': 550.77}, {'connected_gene': 'LINC00554', 'score': 550.77}, {'connected_gene': 'ZIC5', 'score': 13.55}]