PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000505926	[[76506273, 76506320], [76506783, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627298]]	[[76607851, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627298]]
ENST00000340978	[[76506705, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76723243]]	[[76506750, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722379]]
ENST00000346042	[[76506705, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76723243]]	[[76506750, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722379]]
ENST00000264917	[[76506705, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76725632]]	[[76506750, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722379]]
ENST00000342343	[[76506750, 76507089], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722458]]	[[76506750, 76507089], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722379]]
ENST00000333194	[[76506750, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722458]]	[[76506750, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722379]]
ENST00000502945	[[76509768, 76509815], [76542553, 76542672], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284]]	[[76607851, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284]]
ENST00000503963	[[76621517, 76621554], [76624822, 76624882], [76627170, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646943]]	[[76633057, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646943]]
ENST00000505283	[[76706248, 76706953], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76724020]]	[[76707953, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722379]]
NM_001029853	[[76506705, 76507089], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76724081]]	[[76506750, 76507089], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722379]]
NM_001029851	[[76506705, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76724081]]	[[76506750, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722379]]
NM_001029854	[[76506705, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76724081]]	[[76506750, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722379]]
NM_001029852	[[76506705, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76724081]]	[[76506750, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722379]]
NM_003719	[[76506705, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76724081]]	[[76506750, 76507089], [76607818, 76607878], [76621363, 76621554], [76624822, 76624882], [76627226, 76627284], [76633051, 76633140], [76640677, 76640756], [76645243, 76645384], [76646889, 76646978], [76649170, 76649231], [76696072, 76696115], [76700544, 76700622], [76703205, 76703282], [76704717, 76704882], [76707500, 76707546], [76707924, 76708060], [76708935, 76709134], [76714053, 76714271], [76715591, 76715712], [76717645, 76717813], [76721591, 76721721], [76722269, 76722379]]

Promoter

Chrom	Start	End	Description
chr5	76506493	76506540	CAGE_peak_1_at_PDE8B_5end
chr5	76506772	76506787	CAGE_peak_5_at_PDE8B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I077486	77486284	77486961	0.43	[{'connected_gene': 'PDE8B', 'score': 19.43}, {'connected_gene': 'GC05M077504', 'score': 0.34}, {'connected_gene': 'GC05M077427', 'score': 0.22}, {'connected_gene': 'WDR41', 'score': 0.12}]
chr5	GH05I077379	77379342	77380211	0.75	[{'connected_gene': 'PDE8B', 'score': 18.61}, {'connected_gene': 'GC05M077395', 'score': 0.37}, {'connected_gene': 'GC05P077342', 'score': 0.28}]
chr5	GH05I077232	77232683	77233314	0.46	[{'connected_gene': 'PDE8B', 'score': 11.33}, {'connected_gene': 'GC05M077218', 'score': 0.39}, {'connected_gene': 'GC05M077268', 'score': 0.26}]
chr5	GH05I077210	77210200	77211001	1.42	[{'connected_gene': 'PDE8B', 'score': 550.29}, {'connected_gene': 'GC05M077218', 'score': 0.44}]
chr5	GH05I077231	77231124	77232068	0.88	[{'connected_gene': 'ZBED3-AS1', 'score': 10.5}, {'connected_gene': 'S100Z', 'score': 4.76}, {'connected_gene': 'GC05M077218', 'score': 0.39}, {'connected_gene': 'GC05M077268', 'score': 0.25}, {'connected_gene': 'PDE8B', 'score': 0.23}]
chr5	GH05I077490	77490298	77493065	2.04	[{'connected_gene': 'WDR41', 'score': 568.24}, {'connected_gene': 'PDE8B', 'score': 34.85}, {'connected_gene': 'GC05M077504', 'score': 0.37}, {'connected_gene': 'GC05M077427', 'score': 0.21}]
chr5	GH05I077426	77426116	77426265	0.6	[{'connected_gene': 'WDR41', 'score': 16.01}, {'connected_gene': 'GC05M077427', 'score': 0.77}, {'connected_gene': 'GC05M077395', 'score': 0.31}, {'connected_gene': 'PDE8B', 'score': 0.07}]
chr5	GH05I077301	77301596	77301745	0.6	[{'connected_gene': 'WDR41', 'score': 4.18}, {'connected_gene': 'ALDH7A1P1', 'score': 0.39}, {'connected_gene': 'GC05P077342', 'score': 0.26}, {'connected_gene': 'PDE8B', 'score': 0.13}]
chr5	GH05I077291	77291559	77292781	0.31	[{'connected_gene': 'ALDH7A1P1', 'score': 562.61}, {'connected_gene': 'PDE8B', 'score': 6.69}, {'connected_gene': 'GC05P077342', 'score': 0.23}]
chr5	GH05I077282	77282093	77283047	0.64	[{'connected_gene': 'ALDH7A1P1', 'score': 11.54}, {'connected_gene': 'RPL7P23', 'score': 10.07}, {'connected_gene': 'GC05M077268', 'score': 0.77}, {'connected_gene': 'PDE8B', 'score': 0.15}]
chr5	GH05I077166	77166546	77169812	1.12	[{'connected_gene': 'ALDH7A1P1', 'score': 24.85}, {'connected_gene': 'RPL7P23', 'score': 11.0}, {'connected_gene': 'TBCA', 'score': 10.49}, {'connected_gene': 'PDE8B', 'score': 5.13}, {'connected_gene': 'HMGB1P35', 'score': 0.34}, {'connected_gene': 'ZBED3-AS1', 'score': 0.18}]
chr5	GH05I077266	77266469	77266601	0.35	[{'connected_gene': 'S100Z', 'score': 1.86}, {'connected_gene': 'GC05M077268', 'score': 0.39}, {'connected_gene': 'GC05M077218', 'score': 0.25}, {'connected_gene': 'PDE8B', 'score': 0.17}]
chr5	GH05I077144	77144636	77144785	0.63	[{'connected_gene': 'HMGB1P35', 'score': 550.77}, {'connected_gene': 'PDE8B', 'score': 10.42}, {'connected_gene': 'ZBED3-AS1', 'score': 10.18}, {'connected_gene': 'LOC100422441', 'score': 4.99}, {'connected_gene': 'ZBED3', 'score': 0.22}]
chr5	GH05I077155	77155455	77155759	0.28	[{'connected_gene': 'HMGB1P35', 'score': 0.44}, {'connected_gene': 'PDE8B', 'score': 0.34}, {'connected_gene': 'ZBED3-AS1', 'score': 0.2}]