PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000246646	[[39592697, 39593793], [39594344, 39594565], [39594742, 39594868], [39594948, 39595110], [39595454, 39595611], [39596412, 39596495], [39596681, 39597173]]	[[39593663, 39593793], [39594344, 39594565], [39594742, 39594868], [39594948, 39595110], [39595454, 39595611], [39596412, 39596495], [39596681, 39597173]]
NM_006771	[[39592620, 39593793], [39594344, 39594565], [39594742, 39594868], [39594948, 39595110], [39595454, 39595611], [39596412, 39596495], [39596681, 39597596]]	[[39593663, 39593793], [39594344, 39594565], [39594742, 39594868], [39594948, 39595110], [39595454, 39595611], [39596412, 39596495], [39596681, 39597173]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I041490	41490162	41490980	0.54	[{'connected_gene': 'KRT36', 'score': 6.51}, {'connected_gene': 'KRT38', 'score': 5.46}, {'connected_gene': 'KRT35', 'score': 0.44}]
chr17	GH17I041492	41492311	41493466	0.79	[{'connected_gene': 'KRT36', 'score': 550.77}, {'connected_gene': 'KRT34', 'score': 5.5}, {'connected_gene': 'KRT38', 'score': 5.01}, {'connected_gene': 'KRT35', 'score': 0.39}]
chr17	GH17I041424	41424575	41424634	0.5	[{'connected_gene': 'KRT37', 'score': 550.77}, {'connected_gene': 'KRT38', 'score': 0.37}, {'connected_gene': 'LOC100505782', 'score': 0.34}]
chr17	GH17I041440	41440906	41440965	0.5	[{'connected_gene': 'KRT38', 'score': 550.77}, {'connected_gene': 'KRT37', 'score': 0.37}]
chr17	GH17I041183	41182629	41182778	0.59	[{'connected_gene': 'KRT38', 'score': 8.48}, {'connected_gene': 'KRTAP4-2', 'score': 0.77}, {'connected_gene': 'GC17M041182', 'score': 0.77}, {'connected_gene': 'KRTAP4-1', 'score': 0.77}]
chr17	GH17I041391	41391597	41392379	0.31	[{'connected_gene': 'KRT38', 'score': 9.26}, {'connected_gene': 'TOP2A', 'score': 4.12}, {'connected_gene': 'KRT34', 'score': 0.44}, {'connected_gene': 'KRT31', 'score': 0.44}]
chr17	GH17I041392	41392746	41392947	0.2	[{'connected_gene': 'KRT38', 'score': 7.86}, {'connected_gene': 'KRT31', 'score': 0.77}, {'connected_gene': 'KRT34', 'score': 0.44}]
chr17	GH17I041347	41347923	41348925	0.51	[{'connected_gene': 'KRT38', 'score': 9.18}, {'connected_gene': 'KRT31', 'score': 5.88}, {'connected_gene': 'KRT33A', 'score': 0.77}, {'connected_gene': 'ENSG00000108516', 'score': 0.39}]
chr17	GH17I041338	41338033	41343989	0.96	[{'connected_gene': 'KRT38', 'score': 20.57}, {'connected_gene': 'KRTAP16-1', 'score': 10.63}, {'connected_gene': 'KRTAP29-1', 'score': 10.61}, {'connected_gene': 'KRT31', 'score': 10.3}, {'connected_gene': 'LOC100505782', 'score': 10.28}, {'connected_gene': 'KRTAP17-1', 'score': 10.24}, {'connected_gene': 'KRTAP9-6', 'score': 10.09}, {'connected_gene': 'KRT37', 'score': 10.04}, {'connected_gene': 'ENSG00000234477', 'score': 9.95}, {'connected_gene': 'KRT32', 'score': 9.84}, {'connected_gene': 'RNU2-32P', 'score': 9.84}, {'connected_gene': 'KRTAP1-1', 'score': 9.82}, {'connected_gene': 'KRTAP1-3', 'score': 9.82}, {'connected_gene': 'KRTAP1-4', 'score': 9.81}, {'connected_gene': 'KRT40', 'score': 9.42}, {'connected_gene': 'KRT20', 'score': 9.39}, {'connected_gene': 'KRTAP2-5P', 'score': 9.36}, {'connected_gene': 'KRTAP2-4', 'score': 9.36}, {'connected_gene': 'KRT23', 'score': 8.62}, {'connected_gene': 'KRT36', 'score': 6.02}, {'connected_gene': 'ENSG00000108516', 'score': 0.44}, {'connected_gene': 'KRT33A', 'score': 0.44}]
chr17	GH17I041446	41446969	41447118	0.31	[{'connected_gene': 'KRT38', 'score': 7.41}, {'connected_gene': 'KRT43P', 'score': 0.44}]
chr17	GH17I041178	41178203	41179116	0.88	[{'connected_gene': 'KRTAP4-2', 'score': 550.77}, {'connected_gene': 'KRT38', 'score': 8.65}, {'connected_gene': 'KRTAP4-1', 'score': 0.44}]
chr17	GH17I041352	41352992	41353325	0.66	[{'connected_gene': 'KRTAP2-1', 'score': 12.89}, {'connected_gene': 'KRTAP9-1', 'score': 9.33}, {'connected_gene': 'KRTAP2-2', 'score': 9.26}, {'connected_gene': 'KRTAP9-2', 'score': 8.89}, {'connected_gene': 'KRTAP9-9', 'score': 8.32}, {'connected_gene': 'KRT37', 'score': 4.16}, {'connected_gene': 'KRT40', 'score': 2.89}, {'connected_gene': 'KRTAP2-4', 'score': 1.96}, {'connected_gene': 'KRT35', 'score': 1.57}, {'connected_gene': 'KRT38', 'score': 1.52}, {'connected_gene': 'KRT33A', 'score': 0.77}, {'connected_gene': 'KRT33B', 'score': 0.37}]
chr17	GH17I041058	41058207	41063886	1.75	[{'connected_gene': 'KRTAP2-3', 'score': 555.41}, {'connected_gene': 'KRTAP1-3', 'score': 11.81}, {'connected_gene': 'KRTAP1-4', 'score': 11.79}, {'connected_gene': 'KRTAP1-5', 'score': 11.08}, {'connected_gene': 'KRT38', 'score': 4.76}, {'connected_gene': 'KRT27', 'score': 4.31}, {'connected_gene': 'KRTAP2-4', 'score': 0.77}, {'connected_gene': 'GC17M041060', 'score': 0.39}]
chr17	GH17I041377	41377204	41382734	0.76	[{'connected_gene': 'KRT34', 'score': 42.19}, {'connected_gene': 'KRT38', 'score': 19.33}, {'connected_gene': 'KRT32', 'score': 12.99}, {'connected_gene': 'KRT36', 'score': 6.64}, {'connected_gene': 'KRT33B', 'score': 0.39}]
chr17	GH17I041414	41414948	41421905	1.1	[{'connected_gene': 'KRT34', 'score': 37.98}, {'connected_gene': 'KRT32', 'score': 17.5}, {'connected_gene': 'KRT38', 'score': 8.95}, {'connected_gene': 'KRT36', 'score': 6.99}, {'connected_gene': 'KRT31', 'score': 6.63}, {'connected_gene': 'KRT37', 'score': 0.44}, {'connected_gene': 'KRT41P', 'score': 0.44}, {'connected_gene': 'LOC100505782', 'score': 0.37}]
chr17	GH17I041367	41367273	41368380	0.58	[{'connected_gene': 'KRT33B', 'score': 550.77}, {'connected_gene': 'KRT38', 'score': 10.67}, {'connected_gene': 'KRT36', 'score': 6.48}, {'connected_gene': 'KRT33A', 'score': 0.37}]
chr17	GH17I041397	41397090	41398204	0.7	[{'connected_gene': 'KRT31', 'score': 558.05}, {'connected_gene': 'GC17P041399', 'score': 550.77}, {'connected_gene': 'KRT38', 'score': 10.18}]
chr17	GH17I040908	40908603	40917347	1.68	[{'connected_gene': 'KRT23', 'score': 18.92}, {'connected_gene': 'KRTAP3-2', 'score': 15.5}, {'connected_gene': 'MSL1', 'score': 11.03}, {'connected_gene': 'KRT20', 'score': 10.7}, {'connected_gene': 'TMEM99', 'score': 10.03}, {'connected_gene': 'KRT37', 'score': 9.73}, {'connected_gene': 'KRT28', 'score': 9.65}, {'connected_gene': 'KRT40', 'score': 9.55}, {'connected_gene': 'LOC100505782', 'score': 9.3}, {'connected_gene': 'KRT31', 'score': 9.29}, {'connected_gene': 'KRT38', 'score': 9.04}, {'connected_gene': 'KRT19', 'score': 4.71}, {'connected_gene': 'KRTAP1-5', 'score': 3.88}, {'connected_gene': 'KRTAP1-1', 'score': 3.26}, {'connected_gene': 'IGFBP4', 'score': 1.73}, {'connected_gene': 'GC17P040955', 'score': 0.44}, {'connected_gene': 'LOC105371777', 'score': 0.21}]
chr17	GH17I040900	40900290	40905306	1.42	[{'connected_gene': 'KRT23', 'score': 14.48}, {'connected_gene': 'SNORD124', 'score': 12.38}, {'connected_gene': 'KRT12', 'score': 10.98}, {'connected_gene': 'TMEM99', 'score': 10.06}, {'connected_gene': 'KRT28', 'score': 9.87}, {'connected_gene': 'KRTAP3-2', 'score': 9.77}, {'connected_gene': 'KRT40', 'score': 9.73}, {'connected_gene': 'KRT37', 'score': 9.68}, {'connected_gene': 'KRT38', 'score': 9.3}, {'connected_gene': 'KRT26', 'score': 9.14}, {'connected_gene': 'KRTAP3-1', 'score': 8.61}, {'connected_gene': 'GC17P040955', 'score': 0.37}, {'connected_gene': 'KRT20', 'score': 0.37}, {'connected_gene': 'LOC105371777', 'score': 0.23}]
chr17	GH17I041322	41322238	41323078	0.64	[{'connected_gene': 'TBC1D3P7', 'score': 550.77}, {'connected_gene': 'KRT38', 'score': 11.17}, {'connected_gene': 'KRTAP17-1', 'score': 0.44}]
chr17	GH17I041401	41401957	41405386	1.15	[{'connected_gene': 'LOC100505782', 'score': 550.77}, {'connected_gene': 'KRT34', 'score': 38.24}, {'connected_gene': 'KRT38', 'score': 18.08}, {'connected_gene': 'ENSG00000267758', 'score': 11.28}, {'connected_gene': 'KRT36', 'score': 6.85}, {'connected_gene': 'KRT41P', 'score': 0.44}]
chr17	GH17I041307	41307526	41310034	1.24	[{'connected_gene': 'KRTAP16-1', 'score': 550.77}, {'connected_gene': 'KRT38', 'score': 9.76}, {'connected_gene': 'KRT31', 'score': 5.94}, {'connected_gene': 'KRT36', 'score': 5.77}, {'connected_gene': 'TOP2A', 'score': 5.24}, {'connected_gene': 'KRTAP29-1', 'score': 0.44}]
chr17	GH17I041184	41184901	41184960	0.61	[{'connected_gene': 'GC17M041182', 'score': 550.77}, {'connected_gene': 'KRTAP4-1', 'score': 550.77}, {'connected_gene': 'KRT38', 'score': 7.33}, {'connected_gene': 'KRTAP4-2', 'score': 0.44}]
chr17	GH17I041557	41557145	41557543	0.22	[{'connected_gene': 'GC17M041544', 'score': 550.77}, {'connected_gene': 'KRTAP9-2', 'score': 21.61}, {'connected_gene': 'KRTAP9-1', 'score': 12.68}, {'connected_gene': 'KRTAP9-9', 'score': 11.79}, {'connected_gene': 'KRT16', 'score': 7.03}, {'connected_gene': 'KRT37', 'score': 4.05}, {'connected_gene': 'KRTAP2-4', 'score': 2.3}, {'connected_gene': 'KRT38', 'score': 2.26}, {'connected_gene': 'KRT35', 'score': 1.97}, {'connected_gene': 'KRT9', 'score': 0.39}]
chr17	GH17I041499	41499613	41500932	1.52	[{'connected_gene': 'ENSG00000229732', 'score': 550.77}, {'connected_gene': 'KRTAP2-1', 'score': 7.15}, {'connected_gene': 'KRTAP9-2', 'score': 5.39}, {'connected_gene': 'KRT38', 'score': 5.38}, {'connected_gene': 'KRTAP2-2', 'score': 5.25}, {'connected_gene': 'KRTAP9-1', 'score': 5.17}, {'connected_gene': 'KRTAP9-9', 'score': 4.78}, {'connected_gene': 'KRT34', 'score': 4.16}, {'connected_gene': 'KRT37', 'score': 2.64}, {'connected_gene': 'KRTAP2-4', 'score': 1.58}, {'connected_gene': 'KRT36', 'score': 0.44}]