PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000546177	[[96123152, 96123237], [96137442, 96137555], [96240200, 96240738]]	None
ENST00000332349	[[96123157, 96123237], [96123646, 96126421]]	[[96123813, 96125388]]
ENST00000458427	[[96123157, 96126727]]	[[96123813, 96125388]]
NM_001261833	[[96123157, 96123237], [96123646, 96126727]]	[[96123813, 96125388]]
NM_003772	[[96123157, 96126727]]	[[96123813, 96125388]]

Promoter

Chrom	Start	End	Description
chr11	96123170	96123211	CAGE_peak_1_at_JRKL_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I095788	95788221	95792611	2.3	[{'connected_gene': 'CEP57', 'score': 590.6}, {'connected_gene': 'FAM76B', 'score': 586.01}, {'connected_gene': 'FGFR3P2', 'score': 23.27}, {'connected_gene': 'MAML2', 'score': 18.24}, {'connected_gene': 'JRKL', 'score': 14.39}, {'connected_gene': 'LOC101929295', 'score': 10.76}, {'connected_gene': 'MTMR2', 'score': 9.61}, {'connected_gene': 'GC11M095802', 'score': 0.37}]
chr11	GH11I096061	96061706	96063806	0.89	[{'connected_gene': 'JRKL', 'score': 10.68}, {'connected_gene': 'CCDC82', 'score': 10.68}, {'connected_gene': 'GC11M095989', 'score': 0.21}, {'connected_gene': 'GC11P096202', 'score': 0.12}, {'connected_gene': 'MAML2', 'score': 0.06}]
chr11	GH11I096037	96037017	96038426	0.96	[{'connected_gene': 'JRKL', 'score': 11.08}, {'connected_gene': 'CCDC82', 'score': 11.08}, {'connected_gene': 'GC11M095989', 'score': 0.28}, {'connected_gene': 'GC11P096202', 'score': 0.1}, {'connected_gene': 'MAML2', 'score': 0.06}]
chr11	GH11I096391	96391601	96391800	0.2	[{'connected_gene': 'JRKL', 'score': 550.77}, {'connected_gene': 'CCDC82', 'score': 550.77}, {'connected_gene': 'GC11M096475', 'score': 0.18}, {'connected_gene': 'RNA5SP346', 'score': 0.18}]
chr11	GH11I096393	96393897	96394046	0.68	[{'connected_gene': 'JRKL', 'score': 0.77}, {'connected_gene': 'GC11M096475', 'score': 0.18}, {'connected_gene': 'RNA5SP346', 'score': 0.18}]
chr11	GH11I096011	96011538	96017134	1.69	[{'connected_gene': 'MAML2', 'score': 16.12}, {'connected_gene': 'CEP57', 'score': 11.01}, {'connected_gene': 'JRKL', 'score': 10.34}, {'connected_gene': 'FAM76B', 'score': 5.95}, {'connected_gene': 'LOC101929295', 'score': 5.71}, {'connected_gene': 'CCDC82', 'score': 1.78}, {'connected_gene': 'GC11M095989', 'score': 0.37}, {'connected_gene': 'GC11P096202', 'score': 0.09}]
chr11	GH11I096226	96226802	96232199	1.44	[{'connected_gene': 'MAML2', 'score': 6.45}, {'connected_gene': 'MTMR2', 'score': 5.11}, {'connected_gene': 'FAM76B', 'score': 3.14}, {'connected_gene': 'JRKL', 'score': 2.01}, {'connected_gene': 'CCDC82', 'score': 1.77}, {'connected_gene': 'GC11P096202', 'score': 0.31}, {'connected_gene': 'GC11M096338', 'score': 0.14}]
chr11	GH11I096168	96168277	96170061	1.39	[{'connected_gene': 'MAML2', 'score': 9.99}, {'connected_gene': 'MTMR2', 'score': 5.04}, {'connected_gene': 'FAM76B', 'score': 3.82}, {'connected_gene': 'JRKL', 'score': 2.57}, {'connected_gene': 'CCDC82', 'score': 2.3}, {'connected_gene': 'GC11P096202', 'score': 0.29}, {'connected_gene': 'GC11M095989', 'score': 0.09}]
chr11	GH11I096253	96253088	96260827	1.65	[{'connected_gene': 'MAML2', 'score': 24.1}, {'connected_gene': 'CCDC82', 'score': 8.37}, {'connected_gene': 'FAM76B', 'score': 7.15}, {'connected_gene': 'JRKL', 'score': 2.84}, {'connected_gene': 'GC11P096202', 'score': 0.23}, {'connected_gene': 'GC11M096338', 'score': 0.18}]
chr11	GH11I096266	96266931	96268916	1.42	[{'connected_gene': 'MAML2', 'score': 7.85}, {'connected_gene': 'CCDC82', 'score': 4.49}, {'connected_gene': 'FAM76B', 'score': 3.19}, {'connected_gene': 'JRKL', 'score': 1.53}, {'connected_gene': 'GC11P096202', 'score': 0.2}, {'connected_gene': 'GC11M096338', 'score': 0.19}]
chr11	GH11I096206	96206202	96209599	1.51	[{'connected_gene': 'MAML2', 'score': 12.46}, {'connected_gene': 'FAM76B', 'score': 9.51}, {'connected_gene': 'MTMR2', 'score': 4.58}, {'connected_gene': 'CCDC82', 'score': 3.38}, {'connected_gene': 'JRKL', 'score': 1.34}, {'connected_gene': 'GC11P096202', 'score': 0.44}, {'connected_gene': 'GC11M096338', 'score': 0.12}]
chr11	GH11I096262	96262617	96266256	1.45	[{'connected_gene': 'MAML2', 'score': 21.99}, {'connected_gene': 'FAM76B', 'score': 3.3}, {'connected_gene': 'JRKL', 'score': 2.51}, {'connected_gene': 'CCDC82', 'score': 2.17}, {'connected_gene': 'GC11P096202', 'score': 0.21}, {'connected_gene': 'GC11M096338', 'score': 0.18}]
chr11	GH11I096045	96045699	96047127	1.23	[{'connected_gene': 'MAML2', 'score': 7.79}, {'connected_gene': 'FAM76B', 'score': 2.46}, {'connected_gene': 'JRKL', 'score': 2.12}, {'connected_gene': 'CCDC82', 'score': 1.68}, {'connected_gene': 'GC11M095989', 'score': 0.25}, {'connected_gene': 'GC11P096202', 'score': 0.1}]
chr11	GH11I096241	96241148	96244732	1.75	[{'connected_gene': 'MAML2', 'score': 25.1}, {'connected_gene': 'FAM76B', 'score': 16.7}, {'connected_gene': 'CCDC82', 'score': 3.24}, {'connected_gene': 'JRKL', 'score': 2.21}, {'connected_gene': 'GC11P096202', 'score': 0.26}, {'connected_gene': 'GC11M096338', 'score': 0.15}]
chr11	GH11I096337	96337039	96343891	2.51	[{'connected_gene': 'MAML2', 'score': 568.26}, {'connected_gene': 'GC11M096338', 'score': 550.77}, {'connected_gene': 'MIR1260B', 'score': 550.77}, {'connected_gene': 'FAM76B', 'score': 26.9}, {'connected_gene': 'FGFR3P2', 'score': 14.49}, {'connected_gene': 'CEP57', 'score': 11.86}, {'connected_gene': 'CCDC82', 'score': 7.56}, {'connected_gene': 'JRKL', 'score': 3.74}]
chr11	GH11I096388	96388618	96391084	2.02	[{'connected_gene': 'CCDC82', 'score': 633.42}, {'connected_gene': 'JRKL', 'score': 550.77}, {'connected_gene': 'FAM76B', 'score': 10.97}, {'connected_gene': 'MAML2', 'score': 0.25}]
chr11	GH11I096455	96455946	96456846	0.31	[{'connected_gene': 'CCDC82', 'score': 12.23}, {'connected_gene': 'GC11M096475', 'score': 0.37}, {'connected_gene': 'RNA5SP346', 'score': 0.37}, {'connected_gene': 'JRKL-AS1', 'score': 0.23}, {'connected_gene': 'JRKL', 'score': 0.2}]
chr11	GH11I096153	96153202	96158975	1.71	[{'connected_gene': 'FAM76B', 'score': 37.27}, {'connected_gene': 'CEP57', 'score': 32.33}, {'connected_gene': 'FGFR3P2', 'score': 27.8}, {'connected_gene': 'CCDC82', 'score': 13.17}, {'connected_gene': 'JRKL', 'score': 11.32}, {'connected_gene': 'MAML2', 'score': 10.47}, {'connected_gene': 'GC11P096202', 'score': 0.25}, {'connected_gene': 'GC11M095989', 'score': 0.1}]
chr11	GH11I096486	96486931	96488066	0.95	[{'connected_gene': 'LOC105369443', 'score': 5.0}, {'connected_gene': 'GC11M096475', 'score': 0.39}, {'connected_gene': 'RNA5SP346', 'score': 0.39}, {'connected_gene': 'JRKL-AS1', 'score': 0.37}, {'connected_gene': 'JRKL', 'score': 0.15}]
chr11	GH11I096328	96328337	96334097	1.39	[{'connected_gene': 'FGFR3P2', 'score': 23.0}, {'connected_gene': 'FAM76B', 'score': 16.29}, {'connected_gene': 'CCDC82', 'score': 15.34}, {'connected_gene': 'CEP57', 'score': 15.23}, {'connected_gene': 'JRKL', 'score': 14.58}, {'connected_gene': 'MAML2', 'score': 10.03}, {'connected_gene': 'GC11M096338', 'score': 0.44}, {'connected_gene': 'GC11P096202', 'score': 0.13}]
chr11	GH11I096463	96463802	96465199	0.96	[{'connected_gene': 'GC11M096475', 'score': 0.39}, {'connected_gene': 'RNA5SP346', 'score': 0.39}, {'connected_gene': 'JRKL-AS1', 'score': 0.26}, {'connected_gene': 'JRKL', 'score': 0.19}]