PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000418404	[[10201400, 10201473], [10204025, 10204282], [10204885, 10205020], [10206512, 10206608], [10206710, 10206815], [10209775, 10209946], [10210255, 10210381], [10212550, 10212754], [10212838, 10213147], [10214419, 10214544], [10215227, 10215393], [10215890, 10216074], [10216474, 10216671], [10219009, 10219128], [10219215, 10219342], [10222106, 10222496], [10223469, 10223560], [10223667, 10223813], [10224848, 10225025], [10227338, 10227581], [10231182, 10231438], [10233703, 10233840], [10235415, 10235539], [10236390, 10236508], [10243466, 10243554], [10243644, 10243718], [10247116, 10247426], [10248518, 10248689], [10248783, 10248933], [10249996, 10250115], [10253872, 10254011], [10257996, 10258100], [10258211, 10258310], [10258400, 10258464], [10261051, 10261144], [10263276, 10263388], [10263477, 10263505], [10265434, 10265591], [10265676, 10265820], [10267643, 10267859], [10276295, 10276447]]	[[10204267, 10204282], [10204885, 10205020], [10206512, 10206608], [10206710, 10206815], [10209775, 10209946], [10210255, 10210381], [10212550, 10212754], [10212838, 10213147], [10214419, 10214544], [10215227, 10215393], [10215890, 10216074], [10216474, 10216671], [10219009, 10219128], [10219215, 10219342], [10222106, 10222496], [10223469, 10223560], [10223667, 10223813], [10224848, 10225025], [10227338, 10227581], [10231182, 10231438], [10233703, 10233840], [10235415, 10235539], [10236390, 10236508], [10243466, 10243554], [10243644, 10243718], [10247116, 10247426], [10248518, 10248689], [10248783, 10248933], [10249996, 10250115], [10253872, 10254011], [10257996, 10258100], [10258211, 10258310], [10258400, 10258464], [10261051, 10261144], [10263276, 10263388], [10263477, 10263505], [10265434, 10265591], [10265676, 10265820], [10267643, 10267847]]
ENST00000252172	[[10204182, 10204282], [10204885, 10205020], [10206512, 10206608], [10206710, 10206815], [10209775, 10209946], [10210255, 10210381], [10212550, 10212754], [10212838, 10213147], [10214419, 10214544], [10215227, 10215393], [10215890, 10216074], [10216474, 10216671], [10219009, 10219128], [10219215, 10219342], [10222106, 10222496], [10223469, 10223560], [10223667, 10223813], [10224848, 10225025], [10227338, 10227581], [10231182, 10231438], [10233703, 10233840], [10235415, 10235539], [10236390, 10236508], [10243466, 10243554], [10243644, 10243718], [10247116, 10247426], [10248518, 10248689], [10248783, 10248933], [10249996, 10250115], [10253872, 10254011], [10257996, 10258100], [10258211, 10258310], [10258400, 10258464], [10261051, 10261144], [10263276, 10263388], [10263477, 10263505], [10265434, 10265591], [10265676, 10265820], [10267643, 10267859], [10274525, 10274576], [10276295, 10276322]]	[[10204267, 10204282], [10204885, 10205020], [10206512, 10206608], [10206710, 10206815], [10209775, 10209946], [10210255, 10210381], [10212550, 10212754], [10212838, 10213147], [10214419, 10214544], [10215227, 10215393], [10215890, 10216074], [10216474, 10216671], [10219009, 10219128], [10219215, 10219342], [10222106, 10222496], [10223469, 10223560], [10223667, 10223813], [10224848, 10225025], [10227338, 10227581], [10231182, 10231438], [10233703, 10233840], [10235415, 10235539], [10236390, 10236508], [10243466, 10243554], [10243644, 10243718], [10247116, 10247426], [10248518, 10248689], [10248783, 10248933], [10249996, 10250115], [10253872, 10254011], [10257996, 10258100], [10258211, 10258310], [10258400, 10258464], [10261051, 10261144], [10263276, 10263388], [10263477, 10263505], [10265434, 10265591], [10265676, 10265820], [10267643, 10267847]]
NM_003802	[[10204182, 10204282], [10204885, 10205020], [10206512, 10206608], [10206710, 10206815], [10209775, 10209946], [10210255, 10210381], [10212550, 10212754], [10212838, 10213147], [10214419, 10214544], [10215227, 10215393], [10215890, 10216074], [10216474, 10216671], [10219009, 10219128], [10219215, 10219342], [10222106, 10222496], [10223469, 10223560], [10223667, 10223813], [10224848, 10225025], [10227338, 10227581], [10231182, 10231438], [10233703, 10233840], [10235415, 10235539], [10236390, 10236508], [10243466, 10243554], [10243644, 10243718], [10247116, 10247426], [10248518, 10248689], [10248783, 10248933], [10249996, 10250115], [10253872, 10254011], [10257996, 10258100], [10258211, 10258310], [10258400, 10258464], [10261051, 10261144], [10263276, 10263388], [10263477, 10263505], [10265434, 10265591], [10265676, 10265820], [10267643, 10267859], [10274525, 10274576], [10276295, 10276322]]	[[10204267, 10204282], [10204885, 10205020], [10206512, 10206608], [10206710, 10206815], [10209775, 10209946], [10210255, 10210381], [10212550, 10212754], [10212838, 10213147], [10214419, 10214544], [10215227, 10215393], [10215890, 10216074], [10216474, 10216671], [10219009, 10219128], [10219215, 10219342], [10222106, 10222496], [10223469, 10223560], [10223667, 10223813], [10224848, 10225025], [10227338, 10227581], [10231182, 10231438], [10233703, 10233840], [10235415, 10235539], [10236390, 10236508], [10243466, 10243554], [10243644, 10243718], [10247116, 10247426], [10248518, 10248689], [10248783, 10248933], [10249996, 10250115], [10253872, 10254011], [10257996, 10258100], [10258211, 10258310], [10258400, 10258464], [10261051, 10261144], [10263276, 10263388], [10263477, 10263505], [10265434, 10265591], [10265676, 10265820], [10267643, 10267847]]

Promoter

Chrom	Start	End	Description
chr17	10276319	10276324	CAGE_peak_1_at_MYH13_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I009899	9899581	9902423	0.76	[{'connected_gene': 'MYH13', 'score': 10.25}, {'connected_gene': 'RCVRN', 'score': 8.9}, {'connected_gene': 'GC17P009878', 'score': 0.34}]
chr17	GH17I009900	9899424	9899573	0.43	[{'connected_gene': 'MYH13', 'score': 10.25}, {'connected_gene': 'RCVRN', 'score': 0.44}, {'connected_gene': 'GC17P009878', 'score': 0.34}]
chr17	GH17I010338	10338104	10338253	0.2	[{'connected_gene': 'MYH13', 'score': 12.31}, {'connected_gene': 'MYH8', 'score': 10.47}, {'connected_gene': 'GC17P010345', 'score': 0.44}, {'connected_gene': 'ENSG00000264067', 'score': 0.37}, {'connected_gene': 'GC17P010287', 'score': 0.23}]
chr17	GH17I010317	10317323	10317594	0.69	[{'connected_gene': 'MYH13', 'score': 7.68}, {'connected_gene': 'MYH4', 'score': 2.06}, {'connected_gene': 'GAS7', 'score': 1.33}, {'connected_gene': 'ENSG00000264067', 'score': 0.77}, {'connected_gene': 'PIR47100', 'score': 0.44}, {'connected_gene': 'ENSG00000273388', 'score': 0.31}, {'connected_gene': 'GC17P010287', 'score': 0.29}]
chr17	GH17I010417	10417336	10418599	0.2	[{'connected_gene': 'MYH13', 'score': 11.36}, {'connected_gene': 'MYH4', 'score': 11.08}, {'connected_gene': 'MYH8', 'score': 0.77}, {'connected_gene': 'GC17P010421', 'score': 0.77}, {'connected_gene': 'MYHAS', 'score': 0.29}, {'connected_gene': 'ENSG00000272736', 'score': 0.29}]
chr17	GH17I010295	10295864	10296013	0.63	[{'connected_gene': 'MYH13', 'score': 11.07}, {'connected_gene': 'ENSG00000273388', 'score': 0.77}, {'connected_gene': 'GC17P010287', 'score': 0.44}, {'connected_gene': 'PIR47100', 'score': 0.37}]
chr17	GH17I010327	10327684	10327833	0.66	[{'connected_gene': 'MYH13', 'score': 11.6}, {'connected_gene': 'ENSG00000271851', 'score': 11.05}, {'connected_gene': 'ENSG00000264067', 'score': 0.44}, {'connected_gene': 'GC17P010345', 'score': 0.37}, {'connected_gene': 'GC17P010287', 'score': 0.26}]
chr17	GH17I010372	10372995	10373054	0.5	[{'connected_gene': 'MYH13', 'score': 550.77}, {'connected_gene': 'PIR33488', 'score': 0.34}]
chr17	GH17I010420	10420041	10422133	0.7	[{'connected_gene': 'MYH8', 'score': 550.77}, {'connected_gene': 'GC17P010421', 'score': 550.77}, {'connected_gene': 'MYH13', 'score': 11.34}, {'connected_gene': 'MYH4', 'score': 11.09}, {'connected_gene': 'MYHAS', 'score': 0.28}, {'connected_gene': 'ENSG00000272736', 'score': 0.28}]
chr17	GH17I010379	10379864	10381716	0.31	[{'connected_gene': 'MYH8', 'score': 11.59}, {'connected_gene': 'MYH4', 'score': 10.88}, {'connected_gene': 'MYHAS', 'score': 0.77}, {'connected_gene': 'ENSG00000272736', 'score': 0.77}, {'connected_gene': 'MYH13', 'score': 0.44}]
chr17	GH17I010333	10333971	10334234	0.22	[{'connected_gene': 'MYH4', 'score': 15.31}, {'connected_gene': 'ENSG00000264067', 'score': 0.39}, {'connected_gene': 'GC17P010345', 'score': 0.39}, {'connected_gene': 'MYH13', 'score': 0.28}, {'connected_gene': 'GC17P010287', 'score': 0.25}]
chr17	GH17I010291	10291524	10293129	0.77	[{'connected_gene': 'ENSG00000273388', 'score': 550.77}, {'connected_gene': 'MYH13', 'score': 11.39}, {'connected_gene': 'GC17P010287', 'score': 0.44}, {'connected_gene': 'PIR47100', 'score': 0.37}]
chr17	GH17I009918	9918662	9919083	0.58	[{'connected_gene': 'GC17P009918', 'score': 550.77}, {'connected_gene': 'RCVRN', 'score': 16.45}, {'connected_gene': 'MYH13', 'score': 2.56}, {'connected_gene': 'GC17M009941', 'score': 0.34}, {'connected_gene': 'GAS7', 'score': 0.06}]