PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000264257	[[102803432, 102803546], [102804315, 102804385], [102805535, 102805770], [102808384, 102808580], [102818015, 102818175], [102828559, 102828634], [102835412, 102835542], [102836340, 102836477], [102842357, 102842501], [102849422, 102849584], [102851356, 102851737], [102855651, 102856462]]	[[102804327, 102804385], [102805535, 102805770], [102808384, 102808580], [102818015, 102818175], [102828559, 102828634], [102835412, 102835542], [102836340, 102836477], [102842357, 102842501], [102849422, 102849584], [102851356, 102851737], [102855651, 102855701]]
ENST00000441515	[[102803465, 102803542], [102804315, 102804385], [102818015, 102818175], [102828562, 102828634], [102835412, 102835542], [102836340, 102836477], [102842357, 102842501], [102849422, 102849584], [102851356, 102851737], [102855651, 102855798]]	[[102803474, 102803542], [102804315, 102804385], [102818015, 102818175], [102828562, 102828634], [102835412, 102835542], [102836340, 102836477], [102842357, 102842501], [102849422, 102849584], [102851356, 102851737], [102855651, 102855701]]
ENST00000481806	[[102803465, 102803546], [102804315, 102804385], [102818015, 102818175], [102828559, 102828634], [102835412, 102835542], [102836340, 102836477], [102842357, 102842501], [102849422, 102849584], [102851356, 102851737], [102855651, 102855798]]	None
ENST00000421464	[[102803773, 102803802], [102804315, 102804385], [102805535, 102805770], [102808384, 102808580], [102818015, 102818042]]	[[102804327, 102804385], [102805535, 102805770], [102808384, 102808580], [102818015, 102818042]]
ENST00000539491	[[102803773, 102803802], [102804315, 102804385], [102805535, 102805770], [102808384, 102808580], [102818015, 102818175], [102828559, 102828634], [102835412, 102835542], [102836340, 102836477], [102842357, 102842501], [102849422, 102849584], [102851356, 102851737], [102855651, 102855701]]	[[102804327, 102804385], [102805535, 102805770], [102808384, 102808580], [102818015, 102818175], [102828559, 102828634], [102835412, 102835542], [102836340, 102836477], [102842357, 102842501], [102849422, 102849584], [102851356, 102851737], [102855651, 102855701]]
NM_003854	[[102803432, 102803546], [102804315, 102804385], [102805535, 102805770], [102808384, 102808580], [102818015, 102818175], [102828559, 102828634], [102835412, 102835542], [102836340, 102836477], [102842357, 102842501], [102849422, 102849584], [102851356, 102851737], [102855651, 102855811]]	[[102804327, 102804385], [102805535, 102805770], [102808384, 102808580], [102818015, 102818175], [102828559, 102828634], [102835412, 102835542], [102836340, 102836477], [102842357, 102842501], [102849422, 102849584], [102851356, 102851737], [102855651, 102855701]]

Promoter

Chrom	Start	End	Description
chr2	102803477	102803511	CAGE_peak_1_at_IL1RL2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I102301	102301968	102302303	1	[{'connected_gene': 'IL1RL1', 'score': 38.3}, {'connected_gene': 'IL18RAP', 'score': 10.46}, {'connected_gene': 'IL1RL2', 'score': 10.35}, {'connected_gene': 'GC02M102241', 'score': 0.26}, {'connected_gene': 'GC02P101903', 'score': 0.05}]
chr2	GH02I102158	102158443	102160023	1.02	[{'connected_gene': 'IL1RL2', 'score': 16.77}, {'connected_gene': 'ENSG00000226925', 'score': 11.9}, {'connected_gene': 'IL18RAP', 'score': 6.33}, {'connected_gene': 'IL1R1', 'score': 3.97}, {'connected_gene': 'MAP4K4', 'score': 2.64}, {'connected_gene': 'GC02M102141', 'score': 0.37}, {'connected_gene': 'PIR60869', 'score': 0.37}, {'connected_gene': 'GC02P101903', 'score': 0.07}]
chr2	GH02I102238	102238047	102242517	1.56	[{'connected_gene': 'IL1RL2', 'score': 20.32}, {'connected_gene': 'IL1R2', 'score': 13.99}, {'connected_gene': 'ENSG00000226925', 'score': 11.05}, {'connected_gene': 'ENSG00000234389', 'score': 7.41}, {'connected_gene': 'IL18R1', 'score': 5.59}, {'connected_gene': 'IL1R1', 'score': 3.88}, {'connected_gene': 'IL18RAP', 'score': 2.09}, {'connected_gene': 'GC02M102250', 'score': 0.44}, {'connected_gene': 'GC02M102241', 'score': 0.34}, {'connected_gene': 'GC02P101903', 'score': 0.05}]
chr2	GH02I102226	102226210	102229864	1.65	[{'connected_gene': 'IL1RL2', 'score': 17.06}, {'connected_gene': 'ENSG00000226925', 'score': 10.95}, {'connected_gene': 'IL1R2', 'score': 5.28}, {'connected_gene': 'IL1R1', 'score': 4.19}, {'connected_gene': 'IL18RAP', 'score': 3.11}, {'connected_gene': 'GC02M102250', 'score': 0.34}, {'connected_gene': 'GC02P101903', 'score': 0.05}]
chr2	GH02I102005	102005564	102005688	0.46	[{'connected_gene': 'IL1RL2', 'score': 10.68}, {'connected_gene': 'ENSG00000226925', 'score': 9.85}, {'connected_gene': 'IL1R2', 'score': 0.39}, {'connected_gene': 'IL1R1', 'score': 0.22}, {'connected_gene': 'GC02P101903', 'score': 0.15}]
chr2	GH02I102004	102004699	102004848	0.49	[{'connected_gene': 'IL1RL2', 'score': 10.68}, {'connected_gene': 'ENSG00000226925', 'score': 9.85}, {'connected_gene': 'IL1R2', 'score': 0.39}, {'connected_gene': 'IL1R1', 'score': 0.22}, {'connected_gene': 'GC02P101903', 'score': 0.15}]
chr2	GH02I102000	102000807	102002633	0.52	[{'connected_gene': 'IL1RL2', 'score': 10.68}, {'connected_gene': 'ENSG00000226925', 'score': 9.84}, {'connected_gene': 'IL1R2', 'score': 0.44}, {'connected_gene': 'IL1R1', 'score': 0.21}, {'connected_gene': 'GC02P101903', 'score': 0.15}]
chr2	GH02I102006	102006339	102006508	0.8	[{'connected_gene': 'IL1RL2', 'score': 10.69}, {'connected_gene': 'ENSG00000226925', 'score': 9.85}, {'connected_gene': 'IL1R2', 'score': 4.76}, {'connected_gene': 'IL1R1', 'score': 0.22}, {'connected_gene': 'GC02P101903', 'score': 0.15}]
chr2	GH02I102044	102044861	102047303	1.36	[{'connected_gene': 'IL1RL2', 'score': 10.42}, {'connected_gene': 'ENSG00000226925', 'score': 10.29}, {'connected_gene': 'IL1R2', 'score': 6.12}, {'connected_gene': 'IL1R1', 'score': 0.37}, {'connected_gene': 'GC02P101903', 'score': 0.11}]
chr2	GH02I102225	102225201	102225400	0.54	[{'connected_gene': 'IL1RL2', 'score': 11.75}, {'connected_gene': 'ENSG00000226925', 'score': 10.96}, {'connected_gene': 'GC02M102250', 'score': 0.34}, {'connected_gene': 'GC02P101903', 'score': 0.05}]
chr2	GH02I102186	102186939	102186998	0.68	[{'connected_gene': 'IL1RL2', 'score': 550.77}, {'connected_gene': 'GC02M102250', 'score': 0.21}, {'connected_gene': 'GC02P101903', 'score': 0.06}]
chr2	GH02I102209	102209518	102209846	0.51	[{'connected_gene': 'IL1RL2', 'score': 11.7}, {'connected_gene': 'GC02M102250', 'score': 0.26}, {'connected_gene': 'GC02P101903', 'score': 0.06}]
chr2	GH02I102206	102206821	102206910	0.62	[{'connected_gene': 'IL1RL2', 'score': 11.7}, {'connected_gene': 'GC02M102250', 'score': 0.26}, {'connected_gene': 'GC02P101903', 'score': 0.06}]
chr2	GH02I102187	102187400	102188001	0.99	[{'connected_gene': 'IL1RL2', 'score': 557.33}, {'connected_gene': 'ENSG00000234389', 'score': 4.3}, {'connected_gene': 'GC02M102250', 'score': 0.21}, {'connected_gene': 'GC02P101903', 'score': 0.06}]
chr2	GH02I102017	102017813	102017857	0.2	[{'connected_gene': 'IL1R2', 'score': 11.54}, {'connected_gene': 'IL1RL2', 'score': 11.1}, {'connected_gene': 'ENSG00000226925', 'score': 10.53}, {'connected_gene': 'IL1R1', 'score': 0.25}, {'connected_gene': 'GC02P101903', 'score': 0.14}]
chr2	GH02I102019	102018573	102018866	0.2	[{'connected_gene': 'IL1R2', 'score': 16.9}, {'connected_gene': 'IL1RL2', 'score': 11.1}, {'connected_gene': 'ENSG00000226925', 'score': 10.53}, {'connected_gene': 'IL1R1', 'score': 0.25}, {'connected_gene': 'GC02P101903', 'score': 0.13}]
chr2	GH02I102016	102016292	102017773	0.31	[{'connected_gene': 'IL1R2', 'score': 27.09}, {'connected_gene': 'IL1RL2', 'score': 11.1}, {'connected_gene': 'ENSG00000226925', 'score': 10.53}, {'connected_gene': 'IL1R1', 'score': 0.25}, {'connected_gene': 'GC02P101903', 'score': 0.14}]
chr2	GH02I102018	102018056	102018430	0.2	[{'connected_gene': 'IL1R2', 'score': 16.69}, {'connected_gene': 'IL1RL2', 'score': 11.1}, {'connected_gene': 'ENSG00000226925', 'score': 10.53}, {'connected_gene': 'IL1R1', 'score': 0.25}, {'connected_gene': 'GC02P101903', 'score': 0.13}]
chr2	GH02I102040	102040400	102042625	1.44	[{'connected_gene': 'IL1R2', 'score': 21.93}, {'connected_gene': 'IL1R1', 'score': 19.51}, {'connected_gene': 'IL18R1', 'score': 16.31}, {'connected_gene': 'RNF149', 'score': 11.77}, {'connected_gene': 'ENSG00000226925', 'score': 10.47}, {'connected_gene': 'IL1RL2', 'score': 10.42}, {'connected_gene': 'IL18RAP', 'score': 8.88}, {'connected_gene': 'TBC1D8', 'score': 4.64}, {'connected_gene': 'MAP4K4', 'score': 2.82}, {'connected_gene': 'GC02P101903', 'score': 0.12}]
chr2	GH02I102032	102032459	102035286	1.67	[{'connected_gene': 'IL1R2', 'score': 23.63}, {'connected_gene': 'IL1R1', 'score': 20.17}, {'connected_gene': 'IL1RL2', 'score': 12.08}, {'connected_gene': 'ENSG00000226925', 'score': 10.97}, {'connected_gene': 'IL18RAP', 'score': 6.5}, {'connected_gene': 'TBC1D8', 'score': 4.42}, {'connected_gene': 'MAP4K4', 'score': 3.1}, {'connected_gene': 'IL18R1', 'score': 2.21}, {'connected_gene': 'GC02P101903', 'score': 0.12}]
chr2	GH02I102663	102663295	102665274	1.33	[{'connected_gene': 'SLC9A2', 'score': 14.03}, {'connected_gene': 'IL1RL2', 'score': 3.79}, {'connected_gene': 'MFSD9', 'score': 0.19}, {'connected_gene': 'GC02P101903', 'score': 0.03}]
chr2	GH02I102139	102139883	102144859	2.06	[{'connected_gene': 'IL1R1', 'score': 557.88}, {'connected_gene': 'GC02M102141', 'score': 550.77}, {'connected_gene': 'PIR60869', 'score': 550.77}, {'connected_gene': 'ENSG00000226925', 'score': 11.22}, {'connected_gene': 'IL1RL2', 'score': 6.06}, {'connected_gene': 'IL18R1', 'score': 4.93}, {'connected_gene': 'GC02P101903', 'score': 0.07}]
chr2	GH02I102250	102250530	102251961	0.66	[{'connected_gene': 'FAM183DP', 'score': 550.77}, {'connected_gene': 'GC02M102250', 'score': 550.77}, {'connected_gene': 'ENSG00000234389', 'score': 15.62}, {'connected_gene': 'IL18RAP', 'score': 10.58}, {'connected_gene': 'IL1RL2', 'score': 4.51}, {'connected_gene': 'GC02M102241', 'score': 0.39}, {'connected_gene': 'GC02P101903', 'score': 0.05}]
chr2	GH02I102146	102146694	102149856	0.62	[{'connected_gene': 'ENSG00000226925', 'score': 11.23}, {'connected_gene': 'IL1RL2', 'score': 7.44}, {'connected_gene': 'MFSD9', 'score': 7.22}, {'connected_gene': 'IL1R1', 'score': 6.41}, {'connected_gene': 'GC02M102141', 'score': 0.44}, {'connected_gene': 'PIR60869', 'score': 0.44}, {'connected_gene': 'GC02P101903', 'score': 0.07}]
chr2	GH02I102024	102024151	102028508	1.15	[{'connected_gene': 'ENSG00000226925', 'score': 10.98}, {'connected_gene': 'IL1RL2', 'score': 10.73}, {'connected_gene': 'SLC9A2', 'score': 9.17}, {'connected_gene': 'IL1R2', 'score': 8.2}, {'connected_gene': 'IL1R1', 'score': 0.28}, {'connected_gene': 'GC02P101903', 'score': 0.13}]
chr2	GH02I102154	102154234	102156936	1.34	[{'connected_gene': 'ENSG00000226925', 'score': 11.88}, {'connected_gene': 'IL1RL2', 'score': 11.36}, {'connected_gene': 'IL1R1', 'score': 6.35}, {'connected_gene': 'MFSD9', 'score': 6.14}, {'connected_gene': 'IL18R1', 'score': 5.93}, {'connected_gene': 'IL1RL1', 'score': 5.23}, {'connected_gene': 'GC02M102141', 'score': 0.39}, {'connected_gene': 'PIR60869', 'score': 0.39}, {'connected_gene': 'GC02P101903', 'score': 0.07}]
chr2	GH02I102030	102030682	102031400	1.11	[{'connected_gene': 'ENSG00000226925', 'score': 10.69}, {'connected_gene': 'IL1RL2', 'score': 10.42}, {'connected_gene': 'TBC1D8', 'score': 5.11}, {'connected_gene': 'IL1R1', 'score': 0.29}, {'connected_gene': 'IL1R2', 'score': 0.28}, {'connected_gene': 'GC02P101903', 'score': 0.13}]
chr2	GH02I102116	102116400	102118607	0.86	[{'connected_gene': 'ENSG00000226925', 'score': 10.43}, {'connected_gene': 'IL1R1', 'score': 7.75}, {'connected_gene': 'IL1RL2', 'score': 6.42}, {'connected_gene': 'GC02M102141', 'score': 0.34}, {'connected_gene': 'PIR60869', 'score': 0.34}, {'connected_gene': 'GC02P101903', 'score': 0.08}]
chr2	GH02I102126	102126461	102129557	1.14	[{'connected_gene': 'ENSG00000226925', 'score': 10.68}, {'connected_gene': 'IL1R1', 'score': 10.59}, {'connected_gene': 'MFSD9', 'score': 7.37}, {'connected_gene': 'IL1RL2', 'score': 3.44}, {'connected_gene': 'MAP4K4', 'score': 3.35}, {'connected_gene': 'GC02M102141', 'score': 0.39}, {'connected_gene': 'PIR60869', 'score': 0.39}, {'connected_gene': 'GC02P101903', 'score': 0.07}]