PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000359193	[[27100831, 27103070]]	[[27100850, 27101243]]
NM_021064	[[27100816, 27101314]]	[[27100850, 27101243]]

Promoter

Chrom	Start	End	Description
chr6	27100811	27100830	CAGE_peak_2_at_HIST1H2AG_5end
chr6	27806140	27806160	CAGE_peak_2_at_HIST1H2AK_5end,CAGE_peak_2_at_HIST1H2AM_5end,CAGE_peak_3_at_HIST1H2AG_5end,CAGE_peak_3_at_HIST1H2AH_5end,CAGE_peak_3_at_HIST1H2AI_5end,CAGE_peak_3_at_HIST1H2AL_5end
chr6	27860929	27860940	CAGE_peak_3_at_HIST1H2AK_5end,CAGE_peak_3_at_HIST1H2AM_5end,CAGE_peak_4_at_HIST1H2AG_5end,CAGE_peak_4_at_HIST1H2AH_5end,CAGE_peak_4_at_HIST1H2AI_5end,CAGE_peak_4_at_HIST1H2AL_5end
chr6	27860956	27860973	CAGE_peak_1_at_HIST1H2AG_5end,CAGE_peak_1_at_HIST1H2AH_5end,CAGE_peak_1_at_HIST1H2AI_5end,CAGE_peak_1_at_HIST1H2AK_5end,CAGE_peak_1_at_HIST1H2AL_5end,CAGE_peak_1_at_HIST1H2AM_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I027126	27126529	27149515	2.57	[{'connected_gene': 'HIST1H2AH', 'score': 558.4}, {'connected_gene': 'HIST1H4I', 'score': 550.77}, {'connected_gene': 'GC06P027140', 'score': 550.77}, {'connected_gene': 'HIST1H2AG', 'score': 550.77}, {'connected_gene': 'HIST1H2BK', 'score': 550.44}, {'connected_gene': 'HIST1H2BJ', 'score': 550.44}, {'connected_gene': 'ZKSCAN8', 'score': 115.46}, {'connected_gene': 'ABT1', 'score': 100.36}, {'connected_gene': 'HMGN4', 'score': 77.02}, {'connected_gene': 'BTN2A1', 'score': 52.4}, {'connected_gene': 'BTN2A3P', 'score': 52.02}, {'connected_gene': 'ZNF322', 'score': 48.3}, {'connected_gene': 'BTN2A2', 'score': 46.31}, {'connected_gene': 'ZNF391', 'score': 41.79}, {'connected_gene': 'ENSG00000261839', 'score': 36.18}, {'connected_gene': 'LOC102724851', 'score': 35.7}, {'connected_gene': 'ZNF204P', 'score': 32.01}, {'connected_gene': 'HIST1H4K', 'score': 16.51}, {'connected_gene': 'BTN3A1', 'score': 14.65}, {'connected_gene': 'BTN3A3', 'score': 13.62}, {'connected_gene': 'RNU2-62P', 'score': 12.4}, {'connected_gene': 'GUSBP2', 'score': 12.12}, {'connected_gene': 'BTN3A2', 'score': 12.06}, {'connected_gene': 'ENSG00000271755', 'score': 11.69}, {'connected_gene': 'ZNF184', 'score': 11.22}, {'connected_gene': 'HIST1H3H', 'score': 10.93}, {'connected_gene': 'HIST1H2BL', 'score': 10.93}, {'connected_gene': 'HIST1H1D', 'score': 9.81}, {'connected_gene': 'LINC00240', 'score': 8.65}, {'connected_gene': 'IQCB2P', 'score': 3.89}, {'connected_gene': 'PIR51918', 'score': 0.44}, {'connected_gene': 'MIR3143', 'score': 0.44}, {'connected_gene': 'GC06P027137', 'score': 0.44}, {'connected_gene': 'GC06P027128', 'score': 0.44}, {'connected_gene': 'PIR56362', 'score': 0.44}, {'connected_gene': 'GC06P027135', 'score': 0.44}, {'connected_gene': 'GC06M027146', 'score': 0.44}, {'connected_gene': 'GC06M027132', 'score': 0.44}, {'connected_gene': 'GC06P027150', 'score': 0.44}, {'connected_gene': 'PIR46858', 'score': 0.44}, {'connected_gene': 'LOC105374995', 'score': 0.44}]
chr6	GH06I027176	27176026	27179199	1.56	[{'connected_gene': 'TRI-AAT5-2', 'score': 550.77}, {'connected_gene': 'BTN3A2', 'score': 34.82}, {'connected_gene': 'ZKSCAN8', 'score': 31.77}, {'connected_gene': 'BTN2A2', 'score': 28.88}, {'connected_gene': 'ABT1', 'score': 21.08}, {'connected_gene': 'BTN2A1', 'score': 20.74}, {'connected_gene': 'ZNF204P', 'score': 20.46}, {'connected_gene': 'HMGN4', 'score': 18.99}, {'connected_gene': 'ZNF391', 'score': 15.28}, {'connected_gene': 'HIST1H2BK', 'score': 13.05}, {'connected_gene': 'ZNF322', 'score': 12.86}, {'connected_gene': 'LOC102724851', 'score': 12.02}, {'connected_gene': 'ZNF192P1', 'score': 11.35}, {'connected_gene': 'POM121L2', 'score': 11.24}, {'connected_gene': 'ZNF603P', 'score': 10.71}, {'connected_gene': 'BTN2A3P', 'score': 9.98}, {'connected_gene': 'RNU6-471P', 'score': 9.87}, {'connected_gene': 'ZSCAN16-AS1', 'score': 9.78}, {'connected_gene': 'ZNF184', 'score': 1.83}, {'connected_gene': 'VN1R10P', 'score': 1.68}, {'connected_gene': 'HIST1H2AG', 'score': 1.55}, {'connected_gene': 'HIST1H2AH', 'score': 1.52}, {'connected_gene': 'HIST1H4I', 'score': 1.39}, {'connected_gene': 'TRV-CAC6-1', 'score': 0.31}, {'connected_gene': 'GC06M027207', 'score': 0.31}]