PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000607124	[[27093675, 27094241], [27100145, 27100529]]	[[27100148, 27100529]]
ENST00000606923	[[27093857, 27094241], [27100303, 27100327]]	[[27094200, 27094241], [27100303, 27100327]]
ENST00000541790	[[27094057, 27094241], [27095042, 27095180], [27100145, 27100541]]	[[27100148, 27100529]]
ENST00000339812	[[27100148, 27100529]]	[[27100148, 27100529]]
NM_021058	[[27100094, 27100575]]	[[27100148, 27100529]]

Promoter

Chrom	Start	End	Description
chr6	27100565	27100582	CAGE_peak_1_at_HIST1H2BJ_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I027126	27126529	27149515	2.57	[{'connected_gene': 'HIST1H2AH', 'score': 558.4}, {'connected_gene': 'HIST1H4I', 'score': 550.77}, {'connected_gene': 'GC06P027140', 'score': 550.77}, {'connected_gene': 'HIST1H2AG', 'score': 550.77}, {'connected_gene': 'HIST1H2BK', 'score': 550.44}, {'connected_gene': 'HIST1H2BJ', 'score': 550.44}, {'connected_gene': 'ZKSCAN8', 'score': 115.46}, {'connected_gene': 'ABT1', 'score': 100.36}, {'connected_gene': 'HMGN4', 'score': 77.02}, {'connected_gene': 'BTN2A1', 'score': 52.4}, {'connected_gene': 'BTN2A3P', 'score': 52.02}, {'connected_gene': 'ZNF322', 'score': 48.3}, {'connected_gene': 'BTN2A2', 'score': 46.31}, {'connected_gene': 'ZNF391', 'score': 41.79}, {'connected_gene': 'ENSG00000261839', 'score': 36.18}, {'connected_gene': 'LOC102724851', 'score': 35.7}, {'connected_gene': 'ZNF204P', 'score': 32.01}, {'connected_gene': 'HIST1H4K', 'score': 16.51}, {'connected_gene': 'BTN3A1', 'score': 14.65}, {'connected_gene': 'BTN3A3', 'score': 13.62}, {'connected_gene': 'RNU2-62P', 'score': 12.4}, {'connected_gene': 'GUSBP2', 'score': 12.12}, {'connected_gene': 'BTN3A2', 'score': 12.06}, {'connected_gene': 'ENSG00000271755', 'score': 11.69}, {'connected_gene': 'ZNF184', 'score': 11.22}, {'connected_gene': 'HIST1H3H', 'score': 10.93}, {'connected_gene': 'HIST1H2BL', 'score': 10.93}, {'connected_gene': 'HIST1H1D', 'score': 9.81}, {'connected_gene': 'LINC00240', 'score': 8.65}, {'connected_gene': 'IQCB2P', 'score': 3.89}, {'connected_gene': 'PIR51918', 'score': 0.44}, {'connected_gene': 'MIR3143', 'score': 0.44}, {'connected_gene': 'GC06P027137', 'score': 0.44}, {'connected_gene': 'GC06P027128', 'score': 0.44}, {'connected_gene': 'PIR56362', 'score': 0.44}, {'connected_gene': 'GC06P027135', 'score': 0.44}, {'connected_gene': 'GC06M027146', 'score': 0.44}, {'connected_gene': 'GC06M027132', 'score': 0.44}, {'connected_gene': 'GC06P027150', 'score': 0.44}, {'connected_gene': 'PIR46858', 'score': 0.44}, {'connected_gene': 'LOC105374995', 'score': 0.44}]