PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000332142	[[163227916, 163228605], [163229979, 163230172], [163236362, 163236531], [163241197, 163241449], [163250898, 163250995], [163253249, 163253455], [163256698, 163256951], [163279845, 163280045], [163291707, 163292107], [163302527, 163302953], [163360952, 163361167], [163369163, 163369184], [163374239, 163374668], [163393434, 163393590], [163693046, 163693277], [163694952, 163695128]]	[[163228338, 163228605], [163229979, 163230172], [163236362, 163236531], [163241197, 163241449], [163250898, 163250995], [163253249, 163253455], [163256698, 163256951], [163279845, 163280045], [163291707, 163292107], [163302527, 163302953], [163360952, 163361167], [163369163, 163369184], [163374239, 163374668], [163393434, 163393590], [163693046, 163693277], [163694952, 163695028]]
ENST00000328032	[[163279756, 163280045], [163291707, 163292107], [163302527, 163302953], [163360952, 163361167], [163374239, 163374668], [163393434, 163393590], [163693046, 163693277], [163694952, 163695240]]	[[163279779, 163280045], [163291707, 163292107], [163302527, 163302953], [163360952, 163361167], [163374239, 163374668], [163393434, 163393590], [163693046, 163693277], [163694952, 163695028]]
ENST00000477019	[[163358494, 163358804], [163360952, 163361167], [163374239, 163374668], [163384432, 163384597], [163384693, 163384870]]	None
NM_033272	[[163227916, 163228605], [163229979, 163230172], [163236362, 163236531], [163241197, 163241449], [163250898, 163250995], [163253249, 163253455], [163256698, 163256951], [163279845, 163280045], [163291707, 163292107], [163302527, 163302953], [163360952, 163361167], [163369163, 163369184], [163374239, 163374668], [163393434, 163393590], [163693046, 163693277], [163694952, 163695257]]	[[163228338, 163228605], [163229979, 163230172], [163236362, 163236531], [163241197, 163241449], [163250898, 163250995], [163253249, 163253455], [163256698, 163256951], [163279845, 163280045], [163291707, 163292107], [163302527, 163302953], [163360952, 163361167], [163369163, 163369184], [163374239, 163374668], [163393434, 163393590], [163693046, 163693277], [163694952, 163695028]]
NM_173162	[[163279756, 163280045], [163291707, 163292107], [163302527, 163302953], [163360952, 163361167], [163374239, 163374668], [163393434, 163393590], [163693046, 163693277], [163694952, 163695257]]	[[163279779, 163280045], [163291707, 163292107], [163302527, 163302953], [163360952, 163361167], [163374239, 163374668], [163393434, 163393590], [163693046, 163693277], [163694952, 163695028]]

Promoter

Chrom	Start	End	Description
chr2	163695139	163695158	CAGE_peak_3_at_KCNH7_5end
chr2	163695238	163695258	CAGE_peak_2_at_KCNH7_5end
chr2	163695260	163695301	CAGE_peak_1_at_KCNH7_5end
chr2	163695483	163695498	CAGE_peak_5_at_KCNH7_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I162621	162621299	162621650	0.26	[{'connected_gene': 'KCNH7', 'score': 2.02}, {'connected_gene': 'GC02P162561', 'score': 0.21}, {'connected_gene': 'LOC101929570', 'score': 0.11}]
chr2	GH02I162722	162722464	162722833	0.34	[{'connected_gene': 'KCNH7', 'score': 6.05}, {'connected_gene': 'LOC101929570', 'score': 0.25}, {'connected_gene': 'GC02P162561', 'score': 0.1}]
chr2	GH02I162821	162821123	162822011	0.59	[{'connected_gene': 'KCNH7', 'score': 0.37}, {'connected_gene': 'LOC101929570', 'score': 0.23}]
chr2	GH02I162838	162838551	162838700	0.88	[{'connected_gene': 'KCNH7', 'score': 550.77}, {'connected_gene': 'LOC101929570', 'score': 0.2}]
chr2	GH02I162839	162838732	162838791	0.68	[{'connected_gene': 'KCNH7', 'score': 550.77}, {'connected_gene': 'GC02P163000', 'score': 0.1}]
chr2	GH02I162366	162366451	162366567	0.22	[{'connected_gene': 'GCA', 'score': 4.6}, {'connected_gene': 'KCNH7', 'score': 1.52}, {'connected_gene': 'GC02P162329', 'score': 0.28}, {'connected_gene': 'RNA5SP109', 'score': 0.12}]
chr2	GH02I162478	162478971	162479128	0.33	[{'connected_gene': 'GCA', 'score': 5.85}, {'connected_gene': 'RNA5SP109', 'score': 0.37}, {'connected_gene': 'GC02P162329', 'score': 0.11}, {'connected_gene': 'KCNH7', 'score': 0.05}]
chr2	GH02I162732	162732571	162733260	0.56	[{'connected_gene': 'LOC101929570', 'score': 0.28}, {'connected_gene': 'KCNH7', 'score': 0.14}, {'connected_gene': 'GC02P162561', 'score': 0.09}]
chr2	GH02I162711	162711353	162712770	0.59	[{'connected_gene': 'LOC101929570', 'score': 0.22}, {'connected_gene': 'KCNH7', 'score': 0.13}, {'connected_gene': 'GC02P162561', 'score': 0.1}]
chr2	GH02I162475	162475299	162476225	0.49	[{'connected_gene': 'RNA5SP109', 'score': 0.34}, {'connected_gene': 'GC02P162329', 'score': 0.11}, {'connected_gene': 'KCNH7', 'score': 0.05}]
chr2	GH02I162928	162928401	162928660	0.58	[{'connected_gene': 'GC02P163000', 'score': 0.19}, {'connected_gene': 'KCNH7', 'score': 0.17}]
chr2	GH02I162924	162924912	162927937	0.46	[{'connected_gene': 'GC02P163000', 'score': 0.19}, {'connected_gene': 'KCNH7', 'score': 0.17}]
chr2	GH02I162579	162579038	162581037	0.93	[{'connected_gene': 'GC02P162561', 'score': 0.37}, {'connected_gene': 'LOC101929570', 'score': 0.09}, {'connected_gene': 'KCNH7', 'score': 0.07}]
chr2	GH02I162582	162582016	162583200	0.97	[{'connected_gene': 'GC02P162561', 'score': 0.34}, {'connected_gene': 'LOC101929570', 'score': 0.09}, {'connected_gene': 'KCNH7', 'score': 0.07}]
chr2	GH02I162574	162574004	162575818	0.9	[{'connected_gene': 'GC02P162561', 'score': 0.39}, {'connected_gene': 'LOC101929570', 'score': 0.08}, {'connected_gene': 'KCNH7', 'score': 0.07}]