PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000307471	[[23636997, 23637224], [23637585, 23637670], [23650789, 23651172], [23682549, 23684327]]	[[23650934, 23651172], [23682549, 23682734]]
ENST00000484553	[[23637034, 23637224], [23637585, 23637670], [23641489, 23641839]]	None
ENST00000409765	[[23637060, 23637224], [23650789, 23651172], [23682549, 23684326]]	[[23650934, 23651172], [23682549, 23682734]]
ENST00000448353	[[23637133, 23637224], [23637585, 23637670], [23643704, 23643898], [23650789, 23651172], [23682549, 23682643]]	[[23650934, 23651172], [23682549, 23682643]]
ENST00000485233	[[23637341, 23637670], [23650789, 23651127]]	None
ENST00000472407	[[23637456, 23637670], [23643704, 23643898], [23650789, 23651172], [23682549, 23682555]]	None
ENST00000410069	[[23637779, 23637841], [23643760, 23643898], [23650789, 23651172], [23682549, 23682856]]	[[23650934, 23651172], [23682549, 23682734]]
ENST00000486109	[[23637910, 23638137], [23643704, 23643898], [23650789, 23651168]]	None
NM_138771	[[23636997, 23637224], [23637585, 23637670], [23650789, 23651172], [23682549, 23684327]]	[[23650934, 23651172], [23682549, 23682734]]

Promoter

Chrom	Start	End	Description
chr7	23636992	23637074	CAGE_peak_1_at_CCDC126_5end
chr7	23637079	23637093	CAGE_peak_4_at_CCDC126_5end
chr7	23637118	23637129	CAGE_peak_5_at_CCDC126_5end
chr7	23637173	23637184	CAGE_peak_6_at_CCDC126_5end
chr7	23637335	23637356	CAGE_peak_2_at_CCDC126_5end
chr7	23637357	23637368	CAGE_peak_7_at_CCDC126_5end
chr7	23637763	23637771	CAGE_peak_14_at_CCDC126_5end
chr7	23650863	23650867	CAGE_peak_3_at_CCDC126_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr7	GH07I023544	23544982	23545151	0.75	[{'connected_gene': 'CCDC126', 'score': 4.6}, {'connected_gene': 'GC07P023532', 'score': 0.39}, {'connected_gene': 'LOC442517', 'score': 0.37}]
chr7	GH07I023570	23570702	23571031	0.97	[{'connected_gene': 'CCDC126', 'score': 12.89}, {'connected_gene': 'FAM221A', 'score': 7.68}, {'connected_gene': 'LOC442517', 'score': 0.44}, {'connected_gene': 'CLK2P1', 'score': 0.37}]
chr7	GH07I023430	23430201	23432832	1.11	[{'connected_gene': 'CCDC126', 'score': 5.81}, {'connected_gene': 'GC07M023312', 'score': 0.77}, {'connected_gene': 'RNU7-143P', 'score': 0.37}, {'connected_gene': 'IGF2BP3', 'score': 0.28}]
chr7	GH07I023596	23596762	23599493	2.05	[{'connected_gene': 'CCDC126', 'score': 568.94}, {'connected_gene': 'LOC105375187', 'score': 550.77}, {'connected_gene': 'FAM221A', 'score': 9.03}, {'connected_gene': 'FCF1P1', 'score': 0.34}]
chr7	GH07I023461	23461940	23462324	0.38	[{'connected_gene': 'CCDC126', 'score': 4.56}, {'connected_gene': 'KLHL7-AS1', 'score': 4.17}, {'connected_gene': 'IGF2BP3', 'score': 2.01}, {'connected_gene': 'NUPL2', 'score': 1.38}, {'connected_gene': 'GC07P023450', 'score': 0.39}]
chr7	GH07I023628	23628196	23628860	0.69	[{'connected_gene': 'CCDC126', 'score': 16.9}, {'connected_gene': 'FCF1P1', 'score': 0.44}, {'connected_gene': 'ENSG00000228953', 'score': 0.31}]
chr7	GH07I023011	23011589	23014941	2	[{'connected_gene': 'FAM126A', 'score': 565.68}, {'connected_gene': 'CLK2P1', 'score': 21.68}, {'connected_gene': 'CCDC126', 'score': 15.67}, {'connected_gene': 'TOMM7', 'score': 6.78}, {'connected_gene': 'LOC541472', 'score': 6.75}, {'connected_gene': 'ENSG00000226329', 'score': 5.37}, {'connected_gene': 'PIR51294', 'score': 0.15}]
chr7	GH07I023662	23662119	23663435	0.38	[{'connected_gene': 'STK31', 'score': 4.61}, {'connected_gene': 'CCDC126', 'score': 4.57}, {'connected_gene': 'ENSG00000228953', 'score': 0.44}, {'connected_gene': 'FAM221A', 'score': 0.37}]
chr7	GH07I022780	22780913	22782683	0.71	[{'connected_gene': 'TOMM7', 'score': 16.18}, {'connected_gene': 'CLK2P1', 'score': 11.66}, {'connected_gene': 'TRA2A', 'score': 10.68}, {'connected_gene': 'SNHG26', 'score': 10.37}, {'connected_gene': 'CCDC126', 'score': 9.87}, {'connected_gene': 'RPS26P32', 'score': 0.44}, {'connected_gene': 'GC07M022788', 'score': 0.39}]
chr7	GH07I022782	22782722	22782891	0.67	[{'connected_gene': 'TOMM7', 'score': 15.44}, {'connected_gene': 'CLK2P1', 'score': 11.66}, {'connected_gene': 'TRA2A', 'score': 10.68}, {'connected_gene': 'SNHG26', 'score': 10.37}, {'connected_gene': 'CCDC126', 'score': 9.87}, {'connected_gene': 'RPS26P32', 'score': 0.44}, {'connected_gene': 'GC07M022788', 'score': 0.39}]
chr7	GH07I023297	23297578	23300997	2.05	[{'connected_gene': 'MALSU1', 'score': 550.77}, {'connected_gene': 'KLHL7-AS1', 'score': 31.92}, {'connected_gene': 'CLK2P1', 'score': 22.23}, {'connected_gene': 'TRA2A', 'score': 19.49}, {'connected_gene': 'CCDC126', 'score': 9.9}, {'connected_gene': 'ENSG00000232627', 'score': 0.2}]
chr7	GH07I023485	23485712	23487108	0.54	[{'connected_gene': 'RNU7-143P', 'score': 11.49}, {'connected_gene': 'CCDC126', 'score': 4.23}, {'connected_gene': 'RPS2P32', 'score': 0.77}, {'connected_gene': 'GC07P023480', 'score': 0.44}]
chr7	GH07I023462	23462744	23475994	2.88	[{'connected_gene': 'IGF2BP3', 'score': 557.78}, {'connected_gene': 'EEF1A1P6', 'score': 11.67}, {'connected_gene': 'TRA2A', 'score': 9.99}, {'connected_gene': 'CCDC126', 'score': 4.71}, {'connected_gene': 'KLHL7-AS1', 'score': 4.25}, {'connected_gene': 'NUPL2', 'score': 3.75}, {'connected_gene': 'MALSU1', 'score': 1.76}, {'connected_gene': 'GC07P023450', 'score': 0.37}]
chr7	GH07I023722	23722781	23723181	0.69	[{'connected_gene': 'PCMTD1P3', 'score': 550.77}, {'connected_gene': 'STK31', 'score': 42.05}, {'connected_gene': 'CLK2P1', 'score': 11.75}, {'connected_gene': 'TRA2A', 'score': 10.74}, {'connected_gene': 'CCDC126', 'score': 9.97}, {'connected_gene': 'TPT1P7', 'score': 0.17}]
chr7	GH07I023655	23655068	23655320	0.33	[{'connected_gene': 'ENSG00000228953', 'score': 550.77}, {'connected_gene': 'CCDC126', 'score': 5.07}, {'connected_gene': 'FAM221A', 'score': 4.83}, {'connected_gene': 'FCF1P1', 'score': 0.28}]