PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000288207	[[59397276, 59397491], [59399520, 59399649], [59399755, 59399869], [59406642, 59406813], [59406916, 59407075], [59408888, 59409125], [59409426, 59409567], [59415715, 59415826], [59416965, 59417244]]	[[59397467, 59397491], [59399520, 59399649], [59399755, 59399869], [59406642, 59406813], [59406916, 59407075], [59408888, 59409125], [59409426, 59409567], [59415715, 59415826], [59416965, 59417076]]
ENST00000561077	[[59397324, 59397491], [59399520, 59399869], [59406642, 59406813]]	None
ENST00000559622	[[59397355, 59397491], [59406642, 59406813], [59406916, 59407075], [59408888, 59409125], [59415715, 59415826], [59416965, 59417215]]	[[59397467, 59397491], [59406642, 59406813], [59406916, 59407075], [59408888, 59409125], [59415715, 59415826], [59416965, 59417076]]
ENST00000559301	[[59408965, 59409125], [59409426, 59409567], [59415715, 59415989]]	None
NM_004701	[[59397283, 59397491], [59399520, 59399649], [59399755, 59399869], [59406642, 59406813], [59406916, 59407075], [59408888, 59409125], [59409426, 59409567], [59415715, 59415826], [59416965, 59417244]]	[[59397467, 59397491], [59399520, 59399649], [59399755, 59399869], [59406642, 59406813], [59406916, 59407075], [59408888, 59409125], [59409426, 59409567], [59415715, 59415826], [59416965, 59417076]]

Promoter

Chrom	Start	End	Description
chr15	59397275	59397278	CAGE_peak_5_at_CCNB2_5end
chr15	59397289	59397296	CAGE_peak_4_at_CCNB2_5end
chr15	59397298	59397353	CAGE_peak_1_at_CCNB2_5end
chr15	59397366	59397381	CAGE_peak_2_at_CCNB2_5end
chr15	59397404	59397415	CAGE_peak_3_at_CCNB2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I059104	59104319	59106426	2.02	[{'connected_gene': 'CCNB2', 'score': 550.77}, {'connected_gene': 'BNIP2', 'score': 11.35}, {'connected_gene': 'SLTM', 'score': 10.45}, {'connected_gene': 'PIGHP1', 'score': 10.04}, {'connected_gene': 'PIR47582', 'score': 0.77}, {'connected_gene': 'GC15M059055', 'score': 0.12}]