PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000536476	[[46741577, 46741675], [46743450, 46743583], [46744548, 46744701], [46746559, 46746688], [46755034, 46755105], [46761147, 46761289], [46762935, 46763045], [46763505, 46763599], [46764504, 46764610], [46766119, 46766580], [46773968, 46774059], [46796951, 46797158]]	[[46741615, 46741675], [46743450, 46743583], [46744548, 46744701], [46746559, 46746688], [46755034, 46755105], [46761147, 46761289], [46762935, 46763045], [46763505, 46763599], [46764504, 46764610], [46766119, 46766558]]
ENST00000569810	[[46771949, 46772055], [46773968, 46774059], [46824027, 46824319]]	None
ENST00000394809	[[46740890, 46741675], [46743450, 46743583], [46744548, 46744701], [46746559, 46746688], [46755034, 46755105], [46761147, 46761289], [46762935, 46763045], [46763505, 46763599], [46764504, 46764610], [46766119, 46766580], [46771622, 46772055], [46773968, 46774059], [46781628, 46782221]]	[[46741615, 46741675], [46743450, 46743583], [46744548, 46744701], [46746559, 46746688], [46755034, 46755105], [46761147, 46761289], [46762935, 46763045], [46763505, 46763599], [46764504, 46764610], [46766119, 46766580], [46771622, 46772055], [46773968, 46774059], [46781628, 46782105]]
ENST00000565182	[[46741579, 46741675], [46743450, 46743583], [46744548, 46744899]]	None
ENST00000562104	[[46741603, 46741675], [46743450, 46743583], [46744548, 46744701], [46745498, 46745702]]	None
ENST00000564731	[[46759687, 46761289], [46762935, 46763045], [46763505, 46763599], [46764504, 46764610], [46766119, 46766580], [46771622, 46772049]]	None
ENST00000569844	[[46761149, 46761289], [46762935, 46763045], [46763505, 46763849]]	None
NM_001308301	[[46736193, 46741675], [46743450, 46743583], [46744548, 46744701], [46746559, 46746688], [46755034, 46755105], [46761147, 46761289], [46762935, 46763045], [46763505, 46763599], [46764504, 46764610], [46766119, 46766580], [46773968, 46774059], [46796951, 46797158]]	[[46741615, 46741675], [46743450, 46743583], [46744548, 46744701], [46746559, 46746688], [46755034, 46755105], [46761147, 46761289], [46762935, 46763045], [46763505, 46763599], [46764504, 46764610], [46766119, 46766558]]
NM_182493	[[46736193, 46741675], [46743450, 46743583], [46744548, 46744701], [46746559, 46746688], [46755034, 46755105], [46761147, 46761289], [46762935, 46763045], [46763505, 46763599], [46764504, 46764610], [46766119, 46766580], [46771622, 46772055], [46773968, 46774059], [46781628, 46782221]]	[[46741615, 46741675], [46743450, 46743583], [46744548, 46744701], [46746559, 46746688], [46755034, 46755105], [46761147, 46761289], [46762935, 46763045], [46763505, 46763599], [46764504, 46764610], [46766119, 46766580], [46771622, 46772055], [46773968, 46774059], [46781628, 46782105]]

Promoter

Chrom	Start	End	Description
chr16	46772043	46772059	CAGE_peak_6_at_MYLK3_5end
chr16	46782248	46782263	CAGE_peak_1_at_MYLK3_5end
chr16	46797007	46797016	CAGE_peak_7_at_MYLK3_5end
chr16	46797054	46797069	CAGE_peak_4_at_MYLK3_5end
chr16	46797107	46797118	CAGE_peak_3_at_MYLK3_5end
chr16	46797139	46797146	CAGE_peak_5_at_MYLK3_5end
chr16	46797149	46797169	CAGE_peak_2_at_MYLK3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I046863	46863437	46863938	0.46	[{'connected_gene': 'MYLK3', 'score': 10.24}, {'connected_gene': 'ENSG00000261725', 'score': 0.39}, {'connected_gene': 'GPT2', 'score': 0.34}]
chr16	GH16I046746	46746478	46750226	1.76	[{'connected_gene': 'MYLK3', 'score': 566.38}, {'connected_gene': 'SHCBP1', 'score': 13.34}, {'connected_gene': 'ORC6', 'score': 11.25}, {'connected_gene': 'VPS35', 'score': 11.25}, {'connected_gene': 'GPT2', 'score': 3.82}, {'connected_gene': 'GC16M046768', 'score': 0.31}, {'connected_gene': 'GC16P046705', 'score': 0.26}]
chr16	GH16I046742	46742421	46744078	1.49	[{'connected_gene': 'MYLK3', 'score': 33.17}, {'connected_gene': 'ENSG00000261131', 'score': 12.53}, {'connected_gene': 'SHCBP1', 'score': 12.48}, {'connected_gene': 'GC16M046768', 'score': 0.29}, {'connected_gene': 'GC16P046705', 'score': 0.28}]
chr16	GH16I046735	46735361	46738937	0.38	[{'connected_gene': 'MYLK3', 'score': 12.11}, {'connected_gene': 'ORC6', 'score': 11.52}, {'connected_gene': 'VPS35', 'score': 11.52}, {'connected_gene': 'SHCBP1', 'score': 11.3}, {'connected_gene': 'GPT2', 'score': 3.81}, {'connected_gene': 'GC16P046705', 'score': 0.29}, {'connected_gene': 'GC16M046768', 'score': 0.28}]
chr16	GH16I046711	46711201	46711800	0.92	[{'connected_gene': 'MYLK3', 'score': 11.96}, {'connected_gene': 'ORC6', 'score': 11.52}, {'connected_gene': 'VPS35', 'score': 11.52}, {'connected_gene': 'GC16P046705', 'score': 0.44}, {'connected_gene': 'GC16M046768', 'score': 0.21}]
chr16	GH16I046710	46710514	46711065	0.2	[{'connected_gene': 'MYLK3', 'score': 11.96}, {'connected_gene': 'ORC6', 'score': 11.52}, {'connected_gene': 'VPS35', 'score': 11.52}, {'connected_gene': 'GC16P046705', 'score': 0.44}, {'connected_gene': 'GC16M046768', 'score': 0.21}]
chr16	GH16I046758	46758457	46758565	0.69	[{'connected_gene': 'MYLK3', 'score': 24.46}, {'connected_gene': 'GC16M046768', 'score': 0.37}, {'connected_gene': 'GC16P046705', 'score': 0.23}]
chr16	GH16I046741	46740189	46740338	0.94	[{'connected_gene': 'MYLK3', 'score': 12.08}, {'connected_gene': 'GC16M046768', 'score': 0.29}, {'connected_gene': 'GC16P046705', 'score': 0.28}]
chr16	GH16I046862	46862715	46863216	0.74	[{'connected_gene': 'GPT2', 'score': 12.02}, {'connected_gene': 'MYLK3', 'score': 10.24}, {'connected_gene': 'ENSG00000261725', 'score': 0.39}]
chr16	GH16I046836	46836801	46837400	0.46	[{'connected_gene': 'GPT2', 'score': 11.47}, {'connected_gene': 'ORC6', 'score': 11.11}, {'connected_gene': 'VPS35', 'score': 11.11}, {'connected_gene': 'MYLK3', 'score': 10.6}, {'connected_gene': 'C16orf87', 'score': 0.44}, {'connected_gene': 'CKBP1', 'score': 0.44}]
chr16	GH16I046864	46863976	46865111	1.31	[{'connected_gene': 'SHCBP1', 'score': 12.34}, {'connected_gene': 'MYLK3', 'score': 10.24}, {'connected_gene': 'ENSG00000261725', 'score': 0.39}, {'connected_gene': 'GPT2', 'score': 0.37}]
chr16	GH16I046727	46727729	46734556	0.38	[{'connected_gene': 'SHCBP1', 'score': 12.95}, {'connected_gene': 'MYLK3', 'score': 12.1}, {'connected_gene': 'ORC6', 'score': 11.54}, {'connected_gene': 'VPS35', 'score': 11.54}, {'connected_gene': 'ANKRD26P1', 'score': 5.55}, {'connected_gene': 'C16orf87', 'score': 4.23}, {'connected_gene': 'GC16P046705', 'score': 0.31}, {'connected_gene': 'GC16M046768', 'score': 0.26}]
chr16	GH16I046740	46740547	46742067	0.56	[{'connected_gene': 'SHCBP1', 'score': 12.94}, {'connected_gene': 'MYLK3', 'score': 12.54}, {'connected_gene': 'GC16M046768', 'score': 0.29}, {'connected_gene': 'GC16P046705', 'score': 0.28}]
chr16	GH16I046726	46726835	46727648	0.2	[{'connected_gene': 'SHCBP1', 'score': 11.31}, {'connected_gene': 'GC16P046705', 'score': 0.34}, {'connected_gene': 'GC16M046768', 'score': 0.25}, {'connected_gene': 'MYLK3', 'score': 0.21}]
chr16	GH16I046754	46754370	46755988	0.31	[{'connected_gene': 'SHCBP1', 'score': 13.36}, {'connected_gene': 'GC16M046768', 'score': 0.37}, {'connected_gene': 'MYLK3', 'score': 0.28}, {'connected_gene': 'GC16P046705', 'score': 0.23}]
chr16	GH16I046716	46716490	46718222	0.31	[{'connected_gene': 'SHCBP1', 'score': 12.36}, {'connected_gene': 'GC16P046705', 'score': 0.39}, {'connected_gene': 'GC16M046768', 'score': 0.22}, {'connected_gene': 'MYLK3', 'score': 0.19}]
chr16	GH16I046745	46745590	46746299	0.43	[{'connected_gene': 'SHCBP1', 'score': 12.12}, {'connected_gene': 'GPT2', 'score': 3.81}, {'connected_gene': 'GC16M046768', 'score': 0.31}, {'connected_gene': 'MYLK3', 'score': 0.26}, {'connected_gene': 'GC16P046705', 'score': 0.26}]
chr16	GH16I046751	46751259	46754116	0.49	[{'connected_gene': 'SHCBP1', 'score': 11.66}, {'connected_gene': 'GPT2', 'score': 4.71}, {'connected_gene': 'GC16M046768', 'score': 0.34}, {'connected_gene': 'MYLK3', 'score': 0.28}, {'connected_gene': 'GC16P046705', 'score': 0.25}]
chr16	GH16I046756	46756546	46758278	1.16	[{'connected_gene': 'SHCBP1', 'score': 14.0}, {'connected_gene': 'C16orf87', 'score': 6.53}, {'connected_gene': 'ORC6', 'score': 3.09}, {'connected_gene': 'GC16M046768', 'score': 0.37}, {'connected_gene': 'MYLK3', 'score': 0.29}, {'connected_gene': 'GC16P046705', 'score': 0.23}]
chr16	GH16I046761	46761702	46764852	0.52	[{'connected_gene': 'SHCBP1', 'score': 13.77}, {'connected_gene': 'ANKRD26P1', 'score': 4.5}, {'connected_gene': 'GC16M046768', 'score': 0.39}, {'connected_gene': 'MYLK3', 'score': 0.31}, {'connected_gene': 'GC16P046705', 'score': 0.22}]
chr16	GH16I046784	46784089	46788658	0.63	[{'connected_gene': 'SHCBP1', 'score': 14.78}, {'connected_gene': 'LOC100130180', 'score': 0.77}, {'connected_gene': 'MYLK3', 'score': 0.77}, {'connected_gene': 'GC16M046768', 'score': 0.39}]
chr16	GH16I046686	46686163	46691941	2.06	[{'connected_gene': 'ORC6', 'score': 550.77}, {'connected_gene': 'VPS35', 'score': 550.77}, {'connected_gene': 'GPT2', 'score': 13.88}, {'connected_gene': 'SHCBP1', 'score': 12.64}, {'connected_gene': 'ENSG00000261131', 'score': 12.39}, {'connected_gene': 'MYLK3', 'score': 10.89}, {'connected_gene': 'ANKRD26P1', 'score': 5.78}, {'connected_gene': 'ENSG00000280376', 'score': 0.37}]
chr16	GH16I046715	46715222	46716369	0.43	[{'connected_gene': 'ANKRD26P1', 'score': 5.65}, {'connected_gene': 'GC16P046705', 'score': 0.39}, {'connected_gene': 'GC16M046768', 'score': 0.22}, {'connected_gene': 'MYLK3', 'score': 0.19}]
chr16	GH16I046843	46843923	46845162	0.38	[{'connected_gene': 'CKBP1', 'score': 550.77}, {'connected_gene': 'GPT2', 'score': 12.1}, {'connected_gene': 'ORC6', 'score': 11.23}, {'connected_gene': 'VPS35', 'score': 11.23}, {'connected_gene': 'MYLK3', 'score': 10.91}, {'connected_gene': 'C16orf87', 'score': 0.39}]
chr16	GH16I046788	46788993	46791076	1.75	[{'connected_gene': 'LOC100130180', 'score': 550.77}, {'connected_gene': 'MYLK3', 'score': 550.77}, {'connected_gene': 'SHCBP1', 'score': 14.75}]
chr16	GH16I046759	46759844	46761264	0.31	[{'connected_gene': 'GC16M046768', 'score': 0.39}, {'connected_gene': 'MYLK3', 'score': 0.31}, {'connected_gene': 'GC16P046705', 'score': 0.22}]
chr16	GH16I046649	46649174	46651087	1.1	[{'connected_gene': 'ENSG00000260909', 'score': 550.77}, {'connected_gene': 'PIR53331', 'score': 550.77}, {'connected_gene': 'MYLK3', 'score': 10.54}]
chr16	GH16I046713	46713201	46713400	0.51	[{'connected_gene': 'GC16P046705', 'score': 0.44}, {'connected_gene': 'GC16M046768', 'score': 0.21}, {'connected_gene': 'MYLK3', 'score': 0.18}]
chr16	GH16I046712	46712601	46713000	0.51	[{'connected_gene': 'GC16P046705', 'score': 0.44}, {'connected_gene': 'GC16M046768', 'score': 0.21}, {'connected_gene': 'MYLK3', 'score': 0.18}]
chr16	GH16I046714	46714231	46715200	0.49	[{'connected_gene': 'GC16P046705', 'score': 0.44}, {'connected_gene': 'GC16M046768', 'score': 0.22}, {'connected_gene': 'MYLK3', 'score': 0.18}]
chr16	GH16I046695	46695807	46698128	0.43	[{'connected_gene': 'PIR35721', 'score': 550.77}, {'connected_gene': 'GPT2', 'score': 13.29}, {'connected_gene': 'MYLK3', 'score': 10.81}, {'connected_gene': 'ORC6', 'score': 0.44}]