Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000296292 [[53122498, 53126086], [53126384, 53126634], [53133396, 53133502], [53137968, 53138113], [53139688, 53139819], [53140834, 53140885], [53145845, 53145924], [53153899, 53154037], [53155714, 53155816], [53156389, 53156579], [53157739, 53157856], [53159924, 53160010], [53164353, 53164478]] [[53125918, 53126086], [53126384, 53126634], [53133396, 53133502], [53137968, 53138113], [53139688, 53139819], [53140834, 53140885], [53145845, 53145924], [53153899, 53154037], [53155714, 53155816], [53156389, 53156579], [53157739, 53157856], [53159924, 53160010], [53164353, 53164416]]
ENST00000394738 [[53125680, 53126086], [53126384, 53126634], [53133396, 53133502], [53137968, 53138113], [53139688, 53139819], [53140834, 53140885], [53145845, 53145924], [53153899, 53154037], [53155714, 53155816], [53156389, 53156579], [53159924, 53160010], [53164353, 53164469]] [[53125918, 53126086], [53126384, 53126634], [53133396, 53133502], [53137968, 53138113], [53139688, 53139819], [53140834, 53140885], [53145845, 53145924], [53153899, 53154037], [53155714, 53155816], [53156389, 53156579], [53159924, 53160010], [53164353, 53164416]]
ENST00000471158 [[53137588, 53138113], [53139688, 53139819], [53140834, 53140885], [53145845, 53145924], [53153899, 53154037]] None
ENST00000467048 [[53138057, 53138113], [53139688, 53139819], [53140834, 53140885], [53145845, 53145924], [53155714, 53155816], [53156389, 53156579], [53157739, 53157856], [53159924, 53160010], [53164353, 53164427]] [[53138057, 53138113], [53139688, 53139819], [53140834, 53140885], [53145845, 53145924], [53155714, 53155816], [53156389, 53156579], [53157739, 53157856], [53159924, 53160010], [53164353, 53164416]]
NM_052859 [[53122498, 53126086], [53126384, 53126634], [53133396, 53133502], [53137968, 53138113], [53139688, 53139819], [53140834, 53140885], [53145845, 53145924], [53153899, 53154037], [53155714, 53155816], [53156389, 53156579], [53157739, 53157856], [53159924, 53160010], [53164353, 53164470]] [[53125918, 53126086], [53126384, 53126634], [53133396, 53133502], [53137968, 53138113], [53139688, 53139819], [53140834, 53140885], [53145845, 53145924], [53153899, 53154037], [53155714, 53155816], [53156389, 53156579], [53157739, 53157856], [53159924, 53160010], [53164353, 53164416]]
Promoter
Chrom Start End Description
chr3 53164423 53164488 CAGE_peak_1_at_RFT1_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr3 GH03I053195 53195653 53197472 1.37 [{'connected_gene': 'RFT1', 'score': 24.68}, {'connected_gene': 'PRKCD', 'score': 20.67}, {'connected_gene': 'PBRM1', 'score': 9.81}, {'connected_gene': 'SNORD38C', 'score': 9.76}, {'connected_gene': 'TKT', 'score': 5.88}, {'connected_gene': 'DCP1A', 'score': 4.27}, {'connected_gene': 'ITIH4', 'score': 4.07}]
chr3 GH03I053132 53132806 53134051 0.43 [{'connected_gene': 'RFT1', 'score': 15.95}, {'connected_gene': 'PRKCD', 'score': 12.32}, {'connected_gene': 'ITIH4', 'score': 4.08}, {'connected_gene': 'PIR59540', 'score': 0.39}]
chr3 GH03I053123 53123401 53123600 0.51 [{'connected_gene': 'RFT1', 'score': 16.29}, {'connected_gene': 'PRKCD', 'score': 11.07}, {'connected_gene': 'ITIH3', 'score': 4.19}, {'connected_gene': 'ENSG00000272305', 'score': 0.34}]
chr3 GH03I053108 53108929 53110934 0.83 [{'connected_gene': 'RFT1', 'score': 16.6}, {'connected_gene': 'PRKCD', 'score': 10.9}, {'connected_gene': 'ENSG00000243696', 'score': 10.9}, {'connected_gene': 'ITIH3', 'score': 4.46}, {'connected_gene': 'ENSG00000272305', 'score': 0.39}]
chr3 GH03I053191 53191446 53192556 0.31 [{'connected_gene': 'RFT1', 'score': 12.1}, {'connected_gene': 'PRKCD', 'score': 11.83}, {'connected_gene': 'SNORD38C', 'score': 9.88}, {'connected_gene': 'STIMATE', 'score': 9.81}, {'connected_gene': 'TMEM110-MUSTN1', 'score': 9.81}, {'connected_gene': 'ENSG00000243696', 'score': 9.68}, {'connected_gene': 'MUSTN1', 'score': 9.68}, {'connected_gene': 'TKT', 'score': 0.21}]
chr3 GH03I053151 53151324 53153445 0.49 [{'connected_gene': 'RFT1', 'score': 12.03}, {'connected_gene': 'PRKCD', 'score': 7.46}, {'connected_gene': 'PIR59540', 'score': 0.44}]
chr3 GH03I053135 53135615 53136891 0.2 [{'connected_gene': 'RFT1', 'score': 14.5}, {'connected_gene': 'SERBP1P3', 'score': 11.71}, {'connected_gene': 'PIR59540', 'score': 0.44}]
chr3 GH03I053129 53129199 53132156 2.24 [{'connected_gene': 'RFT1', 'score': 566.18}, {'connected_gene': 'SFMBT1', 'score': 4.3}, {'connected_gene': 'PIR59540', 'score': 0.39}]
chr3 GH03I053071 53071868 53074132 1.33 [{'connected_gene': 'RFT1', 'score': 44.58}, {'connected_gene': 'ITIH4', 'score': 22.54}, {'connected_gene': 'STIMATE', 'score': 12.17}, {'connected_gene': 'ITIH1', 'score': 11.22}, {'connected_gene': 'TMEM110-MUSTN1', 'score': 10.41}, {'connected_gene': 'ENSG00000243696', 'score': 10.39}, {'connected_gene': 'MUSTN1', 'score': 10.39}, {'connected_gene': 'SFMBT1', 'score': 2.81}, {'connected_gene': 'DCP1A', 'score': 1.94}, {'connected_gene': 'GC03M053066', 'score': 0.77}, {'connected_gene': 'SERBP1P3', 'score': 0.44}, {'connected_gene': 'ENSG00000272305', 'score': 0.31}]
chr3 GH03I053090 53090028 53095581 0.81 [{'connected_gene': 'RFT1', 'score': 55.27}, {'connected_gene': 'ITIH4', 'score': 26.05}, {'connected_gene': 'STIMATE', 'score': 9.82}, {'connected_gene': 'TMEM110-MUSTN1', 'score': 9.82}, {'connected_gene': 'ENSG00000243696', 'score': 9.81}, {'connected_gene': 'MUSTN1', 'score': 9.81}, {'connected_gene': 'ENSG00000272305', 'score': 0.44}, {'connected_gene': 'GC03M053066', 'score': 0.37}]
chr3 GH03I053083 53083552 53084279 0.63 [{'connected_gene': 'RFT1', 'score': 26.24}, {'connected_gene': 'ITIH4', 'score': 26.2}, {'connected_gene': 'GC03M053066', 'score': 0.44}, {'connected_gene': 'ENSG00000272305', 'score': 0.37}]
chr3 GH03I053227 53227362 53233773 0.46 [{'connected_gene': 'RFT1', 'score': 11.43}, {'connected_gene': 'SNORD38C', 'score': 10.13}, {'connected_gene': 'TKT', 'score': 7.13}, {'connected_gene': 'PRKCD', 'score': 5.36}, {'connected_gene': 'DCP1A', 'score': 5.1}, {'connected_gene': 'ITIH4', 'score': 4.14}]
chr3 GH03I053128 53128601 53128800 0.4 [{'connected_gene': 'RFT1', 'score': 566.69}, {'connected_gene': 'ENSG00000272305', 'score': 0.31}]
chr3 GH03I053492 53492724 53495000 1.89 [{'connected_gene': 'CACNA1D', 'score': 550.1}, {'connected_gene': 'ACTR8', 'score': 5.11}, {'connected_gene': 'DCP1A', 'score': 4.35}, {'connected_gene': 'TKT', 'score': 4.31}, {'connected_gene': 'RFT1', 'score': 3.97}, {'connected_gene': 'RPS25P4', 'score': 0.37}, {'connected_gene': 'GC03P053524', 'score': 0.29}]
chr3 GH03I052769 52769836 52771938 2.02 [{'connected_gene': 'NEK4', 'score': 550.77}, {'connected_gene': 'PBRM1', 'score': 60.08}, {'connected_gene': 'RRP9', 'score': 21.46}, {'connected_gene': 'RFT1', 'score': 13.2}, {'connected_gene': 'ITIH3', 'score': 12.78}, {'connected_gene': 'ITIH4-AS1', 'score': 11.29}, {'connected_gene': 'ITIH4', 'score': 11.27}, {'connected_gene': 'ENSG00000243696', 'score': 11.27}, {'connected_gene': 'SNORD69', 'score': 10.51}, {'connected_gene': 'GNL3', 'score': 10.5}, {'connected_gene': 'MUSTN1', 'score': 10.49}, {'connected_gene': 'ENSG00000222345', 'score': 10.45}, {'connected_gene': 'SNORD19B', 'score': 10.44}, {'connected_gene': 'SNORD19', 'score': 10.44}, {'connected_gene': 'ENSG00000252787', 'score': 10.44}, {'connected_gene': 'TMEM110-MUSTN1', 'score': 10.41}, {'connected_gene': 'STIMATE', 'score': 10.41}, {'connected_gene': 'LOC101059924', 'score': 0.37}]
chr3 GH03I053517 53517757 53520554 1.13 [{'connected_gene': 'GLT8D1', 'score': 16.13}, {'connected_gene': 'RFT1', 'score': 12.28}, {'connected_gene': 'CACNA1D', 'score': 12.09}, {'connected_gene': 'SNORD38C', 'score': 9.95}, {'connected_gene': 'PBRM1', 'score': 9.68}, {'connected_gene': 'NT5DC2', 'score': 5.37}, {'connected_gene': 'TKT', 'score': 4.52}, {'connected_gene': 'GC03P053524', 'score': 0.44}, {'connected_gene': 'RPS25P4', 'score': 0.26}]
chr3 GH03I053140 53140402 53141800 1.43 [{'connected_gene': 'GLT8D1', 'score': 24.09}, {'connected_gene': 'RFT1', 'score': 22.26}, {'connected_gene': 'NISCH', 'score': 19.52}, {'connected_gene': 'PRKCD', 'score': 14.47}, {'connected_gene': 'ACTR8', 'score': 11.38}, {'connected_gene': 'NEK4', 'score': 11.24}, {'connected_gene': 'STIMATE', 'score': 8.07}, {'connected_gene': 'ITIH4', 'score': 7.34}, {'connected_gene': 'DCP1A', 'score': 6.17}, {'connected_gene': 'ITIH3', 'score': 4.87}, {'connected_gene': 'PBRM1', 'score': 1.98}, {'connected_gene': 'TKT', 'score': 1.23}, {'connected_gene': 'PIR59540', 'score': 0.77}]
chr3 GH03I053345 53345960 53348690 2.35 [{'connected_gene': 'DCP1A', 'score': 561.19}, {'connected_gene': 'NISCH', 'score': 37.22}, {'connected_gene': 'PBRM1', 'score': 23.95}, {'connected_gene': 'ENSG00000271976', 'score': 20.08}, {'connected_gene': 'RFT1', 'score': 13.15}, {'connected_gene': 'PHF7', 'score': 11.26}, {'connected_gene': 'ENSG00000212608', 'score': 11.08}, {'connected_gene': 'PRKCD', 'score': 10.97}, {'connected_gene': 'NEK4', 'score': 10.4}, {'connected_gene': 'ACTR8', 'score': 10.35}, {'connected_gene': 'GNL3', 'score': 10.14}, {'connected_gene': 'NT5DC2', 'score': 9.91}, {'connected_gene': 'TKT', 'score': 5.96}, {'connected_gene': 'STIMATE', 'score': 2.31}, {'connected_gene': 'SNORD38C', 'score': 0.39}, {'connected_gene': 'CACNA1D', 'score': 0.37}, {'connected_gene': 'GC03P053298', 'score': 0.25}]
chr3 GH03I053186 53186031 53187272 0.31 [{'connected_gene': 'PRKCD', 'score': 16.75}, {'connected_gene': 'RFT1', 'score': 11.74}, {'connected_gene': 'TKT', 'score': 0.2}]
chr3 GH03I053184 53184639 53185740 0.38 [{'connected_gene': 'PRKCD', 'score': 11.85}, {'connected_gene': 'RFT1', 'score': 11.75}, {'connected_gene': 'TKT', 'score': 0.19}]
chr3 GH03I053155 53155695 53164377 2.22 [{'connected_gene': 'PRKCD', 'score': 563.78}, {'connected_gene': 'RFT1', 'score': 11.77}, {'connected_gene': 'SERBP1P3', 'score': 4.69}, {'connected_gene': 'GNL3', 'score': 4.15}, {'connected_gene': 'TKT', 'score': 0.15}]
chr3 GH03I053190 53190428 53190988 0.43 [{'connected_gene': 'PRKCD', 'score': 11.85}, {'connected_gene': 'RFT1', 'score': 11.78}, {'connected_gene': 'STIMATE', 'score': 9.01}, {'connected_gene': 'TMEM110-MUSTN1', 'score': 9.01}, {'connected_gene': 'MUSTN1', 'score': 9.0}, {'connected_gene': 'ENSG00000243696', 'score': 9.0}, {'connected_gene': 'TKT', 'score': 0.2}]
chr3 GH03I053187 53187669 53190095 0.66 [{'connected_gene': 'PRKCD', 'score': 19.27}, {'connected_gene': 'RFT1', 'score': 11.79}, {'connected_gene': 'STIMATE', 'score': 9.01}, {'connected_gene': 'TMEM110-MUSTN1', 'score': 9.01}, {'connected_gene': 'ENSG00000243696', 'score': 9.0}, {'connected_gene': 'MUSTN1', 'score': 9.0}, {'connected_gene': 'TKT', 'score': 0.2}]
chr3 GH03I053192 53192663 53194800 0.89 [{'connected_gene': 'PRKCD', 'score': 19.76}, {'connected_gene': 'RFT1', 'score': 12.1}, {'connected_gene': 'SNORD38C', 'score': 9.76}, {'connected_gene': 'ITIH4', 'score': 4.27}, {'connected_gene': 'PPM1M', 'score': 4.0}, {'connected_gene': 'TKT', 'score': 0.21}]
chr3 GH03I053134 53134601 53135001 1.15 [{'connected_gene': 'PRKCD', 'score': 12.32}, {'connected_gene': 'RFT1', 'score': 0.77}, {'connected_gene': 'PIR59540', 'score': 0.44}]
chr3 GH03I053102 53102581 53103137 1.14 [{'connected_gene': 'PRKCD', 'score': 16.77}, {'connected_gene': 'STIMATE', 'score': 12.59}, {'connected_gene': 'RFT1', 'score': 11.9}, {'connected_gene': 'ENSG00000243696', 'score': 10.61}, {'connected_gene': 'TMEM110-MUSTN1', 'score': 9.9}, {'connected_gene': 'MUSTN1', 'score': 9.89}, {'connected_gene': 'DCP1A', 'score': 4.25}, {'connected_gene': 'PBRM1', 'score': 2.72}, {'connected_gene': 'ENSG00000272305', 'score': 0.77}]
chr3 GH03I053137 53137945 53138054 0.7 [{'connected_gene': 'PBRM1', 'score': 16.02}, {'connected_gene': 'RFT1', 'score': 12.8}, {'connected_gene': 'PIR59540', 'score': 0.44}]
chr3 GH03I052683 52683797 52688844 2.26 [{'connected_gene': 'PBRM1', 'score': 605.04}, {'connected_gene': 'GNL3', 'score': 563.03}, {'connected_gene': 'RRP9', 'score': 21.56}, {'connected_gene': 'RFT1', 'score': 12.41}, {'connected_gene': 'ABHD14B', 'score': 10.37}, {'connected_gene': 'ITIH1', 'score': 5.37}, {'connected_gene': 'ENSG00000280904', 'score': 0.77}]
chr3 GH03I052739 52739072 52740909 0.31 [{'connected_gene': 'PBRM1', 'score': 38.37}, {'connected_gene': 'GNL3', 'score': 21.8}, {'connected_gene': 'ITIH4', 'score': 19.08}, {'connected_gene': 'RFT1', 'score': 12.13}, {'connected_gene': 'RRP9', 'score': 12.0}, {'connected_gene': 'GLT8D1', 'score': 11.83}, {'connected_gene': 'SNORD69', 'score': 11.15}, {'connected_gene': 'ITIH4-AS1', 'score': 11.0}, {'connected_gene': 'ENSG00000243696', 'score': 10.97}, {'connected_gene': 'MUSTN1', 'score': 10.66}, {'connected_gene': 'TMEM110-MUSTN1', 'score': 10.61}, {'connected_gene': 'STIMATE', 'score': 10.61}, {'connected_gene': 'NT5DC2', 'score': 10.01}, {'connected_gene': 'SMIM4', 'score': 10.01}, {'connected_gene': 'STAB1', 'score': 10.0}, {'connected_gene': 'LOC100499399', 'score': 0.77}, {'connected_gene': 'LOC101059924', 'score': 0.39}, {'connected_gene': 'NEK4', 'score': 0.29}]
chr3 GH03I053354 53354779 53355851 1.09 [{'connected_gene': 'PBRM1', 'score': 17.32}, {'connected_gene': 'SNORD38C', 'score': 11.61}, {'connected_gene': 'ENSG00000212608', 'score': 11.11}, {'connected_gene': 'GLT8D1', 'score': 10.4}, {'connected_gene': 'GNL3', 'score': 10.07}, {'connected_gene': 'DCP1A', 'score': 10.05}, {'connected_gene': 'RFT1', 'score': 9.9}, {'connected_gene': 'TKT', 'score': 5.96}, {'connected_gene': 'LOC105377094', 'score': 0.37}, {'connected_gene': 'CACNA1D', 'score': 0.31}, {'connected_gene': 'GC03P053298', 'score': 0.22}]
chr3 GH03I052224 52224110 52227377 1.45 [{'connected_gene': 'TLR9', 'score': 550.77}, {'connected_gene': 'GLYCTK', 'score': 12.74}, {'connected_gene': 'PPM1M', 'score': 11.34}, {'connected_gene': 'PBRM1', 'score': 11.23}, {'connected_gene': 'RFT1', 'score': 4.45}, {'connected_gene': 'NEK4', 'score': 4.45}, {'connected_gene': 'ENSG00000173366', 'score': 0.44}, {'connected_gene': 'ENSG00000280003', 'score': 0.44}]
chr3 GH03I053043 53043333 53047245 1.93 [{'connected_gene': 'SFMBT1', 'score': 566.92}, {'connected_gene': 'GC03P053048', 'score': 550.77}, {'connected_gene': 'ITIH4', 'score': 32.22}, {'connected_gene': 'RFT1', 'score': 26.35}, {'connected_gene': 'PBRM1', 'score': 17.35}, {'connected_gene': 'STIMATE', 'score': 10.55}, {'connected_gene': 'SNORD19B', 'score': 10.07}, {'connected_gene': 'PRKCD', 'score': 10.05}, {'connected_gene': 'ITIH3', 'score': 4.2}, {'connected_gene': 'LOC105377135', 'score': 0.25}, {'connected_gene': 'ENSG00000272305', 'score': 0.23}]
chr3 GH03I053103 53103903 53105173 0.2 [{'connected_gene': 'ITIH4', 'score': 13.78}, {'connected_gene': 'RFT1', 'score': 11.9}, {'connected_gene': 'PRKCD', 'score': 10.88}, {'connected_gene': 'ENSG00000243696', 'score': 10.61}, {'connected_gene': 'STIMATE', 'score': 9.9}, {'connected_gene': 'TMEM110-MUSTN1', 'score': 9.9}, {'connected_gene': 'MUSTN1', 'score': 9.89}, {'connected_gene': 'ENSG00000272305', 'score': 0.44}]
chr3 GH03I053112 53112730 53115174 1.03 [{'connected_gene': 'ITIH4', 'score': 17.26}, {'connected_gene': 'RFT1', 'score': 16.42}, {'connected_gene': 'PRKCD', 'score': 10.92}, {'connected_gene': 'ENSG00000243696', 'score': 10.9}, {'connected_gene': 'ITIH3', 'score': 4.72}, {'connected_gene': 'ENSG00000272305', 'score': 0.39}]
chr3 GH03I052840 52840099 52843739 1 [{'connected_gene': 'ITIH4', 'score': 45.13}, {'connected_gene': 'RFT1', 'score': 15.81}, {'connected_gene': 'ITIH1', 'score': 4.82}, {'connected_gene': 'GLYCTK', 'score': 4.58}, {'connected_gene': 'RPL29', 'score': 3.68}, {'connected_gene': 'PIR43341', 'score': 0.77}, {'connected_gene': 'MIR8064', 'score': 0.77}, {'connected_gene': 'TMEM110-MUSTN1', 'score': 0.22}, {'connected_gene': 'STIMATE', 'score': 0.22}]
chr3 GH03I052234 52233877 52236124 0.57 [{'connected_gene': 'ITIH4', 'score': 15.75}, {'connected_gene': 'PPM1M', 'score': 15.0}, {'connected_gene': 'NT5DC2', 'score': 7.51}, {'connected_gene': 'RFT1', 'score': 4.41}, {'connected_gene': 'LOC101929054', 'score': 0.77}, {'connected_gene': 'ENSG00000173366', 'score': 0.77}, {'connected_gene': 'TWF2', 'score': 0.77}]
chr3 GH03I052703 52703448 52708025 2.26 [{'connected_gene': 'SPCS1', 'score': 550.77}, {'connected_gene': 'GLT8D1', 'score': 550.77}, {'connected_gene': 'PBRM1', 'score': 30.81}, {'connected_gene': 'RFT1', 'score': 4.56}]
chr3 GH03I052187 52187709 52191347 1.27 [{'connected_gene': 'POC1A', 'score': 11.72}, {'connected_gene': 'DUSP7', 'score': 10.41}, {'connected_gene': 'WDR82', 'score': 10.4}, {'connected_gene': 'GLYCTK', 'score': 10.4}, {'connected_gene': 'MIR135A1', 'score': 10.39}, {'connected_gene': 'GLYCTK-AS1', 'score': 10.38}, {'connected_gene': 'PCBP4', 'score': 9.99}, {'connected_gene': 'GPR62', 'score': 9.98}, {'connected_gene': 'PBRM1', 'score': 8.5}, {'connected_gene': 'RFT1', 'score': 4.77}, {'connected_gene': 'ALDOAP1', 'score': 0.77}]
chr3 GH03I052274 52274220 52291489 2.5 [{'connected_gene': 'GLYCTK', 'score': 568.52}, {'connected_gene': 'WDR82', 'score': 550.44}, {'connected_gene': 'LOC101929054', 'score': 28.2}, {'connected_gene': 'PPM1M', 'score': 28.18}, {'connected_gene': 'TWF2', 'score': 23.58}, {'connected_gene': 'ITIH4', 'score': 20.35}, {'connected_gene': 'PBRM1', 'score': 19.2}, {'connected_gene': 'ENSG00000173366', 'score': 11.39}, {'connected_gene': 'TLR9', 'score': 11.37}, {'connected_gene': 'SEMA3G', 'score': 10.74}, {'connected_gene': 'NT5DC2', 'score': 8.65}, {'connected_gene': 'RPL29', 'score': 4.61}, {'connected_gene': 'ITIH3', 'score': 4.47}, {'connected_gene': 'RFT1', 'score': 4.37}, {'connected_gene': 'NEK4', 'score': 4.18}, {'connected_gene': 'GC03P052278', 'score': 0.77}, {'connected_gene': 'GC03M052276', 'score': 0.44}, {'connected_gene': 'GC03M052275', 'score': 0.44}, {'connected_gene': 'GLYCTK-AS1', 'score': 0.37}]
chr3 GH03I052998 52998556 52999954 0.6 [{'connected_gene': 'LOC105377135', 'score': 550.77}, {'connected_gene': 'ITIH4', 'score': 25.7}, {'connected_gene': 'RFT1', 'score': 10.43}, {'connected_gene': 'SFMBT1', 'score': 0.25}, {'connected_gene': 'GC03P053048', 'score': 0.25}, {'connected_gene': 'ENSG00000272305', 'score': 0.15}]
chr3 GH03I052236 52236187 52241390 2.51 [{'connected_gene': 'LOC101929054', 'score': 567.28}, {'connected_gene': 'TWF2', 'score': 552.75}, {'connected_gene': 'GLYCTK', 'score': 30.07}, {'connected_gene': 'RAD54L2', 'score': 26.53}, {'connected_gene': 'PBRM1', 'score': 25.12}, {'connected_gene': 'RRP9', 'score': 20.38}, {'connected_gene': 'WDR82', 'score': 14.44}, {'connected_gene': 'RFT1', 'score': 12.39}, {'connected_gene': 'MIR135A1', 'score': 11.4}, {'connected_gene': 'GLYCTK-AS1', 'score': 11.39}, {'connected_gene': 'ABHD14B', 'score': 10.42}, {'connected_gene': 'PPM1M', 'score': 2.27}, {'connected_gene': 'ENSG00000173366', 'score': 0.44}]
chr3 GH03I052298 52298201 52301103 1.34 [{'connected_gene': 'GLYCTK-AS1', 'score': 550.77}, {'connected_gene': 'PBRM1', 'score': 19.26}, {'connected_gene': 'GLYCTK', 'score': 18.49}, {'connected_gene': 'PPM1M', 'score': 16.5}, {'connected_gene': 'RFT1', 'score': 13.51}, {'connected_gene': 'RRP9', 'score': 13.07}, {'connected_gene': 'TWF2', 'score': 6.4}, {'connected_gene': 'DNAH1', 'score': 0.37}]
chr3 GH03I053143 53142001 53142400 0.4 [{'connected_gene': 'PIR59540', 'score': 0.77}, {'connected_gene': 'RFT1', 'score': 0.39}]
chr3 GH03I053142 53142801 53143800 0.79 [{'connected_gene': 'PIR59540', 'score': 550.77}, {'connected_gene': 'RFT1', 'score': 0.39}]
chr3 GH03I052231 52231300 52232255 0.76 [{'connected_gene': 'ENSG00000173366', 'score': 550.77}, {'connected_gene': 'NEK4', 'score': 4.82}, {'connected_gene': 'RFT1', 'score': 4.49}, {'connected_gene': 'LOC101929054', 'score': 0.44}, {'connected_gene': 'TWF2', 'score': 0.44}]
chr3 GH03I052833 52833944 52837560 1.47 [{'connected_gene': 'ENSG00000243696', 'score': 550.77}, {'connected_gene': 'MUSTN1', 'score': 550.77}, {'connected_gene': 'ITIH4', 'score': 48.09}, {'connected_gene': 'RFT1', 'score': 9.12}, {'connected_gene': 'ITIH1', 'score': 4.83}, {'connected_gene': 'PIR43341', 'score': 0.77}, {'connected_gene': 'STIMATE', 'score': 0.21}, {'connected_gene': 'TMEM110-MUSTN1', 'score': 0.21}]
chr3 GH03I053286 53286455 53288598 0.43 [{'connected_gene': 'GC03P053288', 'score': 550.77}, {'connected_gene': 'SNORD38C', 'score': 11.24}, {'connected_gene': 'RFT1', 'score': 9.75}, {'connected_gene': 'TKT', 'score': 8.48}, {'connected_gene': 'GC03M053283', 'score': 0.77}, {'connected_gene': 'GC03M053287', 'score': 0.77}, {'connected_gene': 'DCP1A', 'score': 0.21}]

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