PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000370920	[[71528973, 71530820], [71532458, 71532617], [71534958, 71535045], [71536509, 71536679], [71537803, 71537938], [71538154, 71538231], [71542477, 71542560], [71544139, 71544248], [71544338, 71544391], [71546622, 71546980]]	[[71530756, 71530820], [71532458, 71532617], [71534958, 71535045], [71536509, 71536679], [71537803, 71537938], [71538154, 71538231], [71542477, 71542560], [71544139, 71544248], [71544338, 71544391], [71546622, 71546678]]
ENST00000477096	[[71528979, 71530820], [71531360, 71533196]]	None
ENST00000254821	[[71529019, 71530820], [71531360, 71531435], [71532458, 71532617], [71534958, 71535045], [71536509, 71536679], [71537803, 71537938], [71538154, 71538231], [71542477, 71542560], [71544139, 71544248], [71544338, 71544391], [71546622, 71546694]]	[[71531401, 71531435], [71532458, 71532617], [71534958, 71535045], [71536509, 71536679], [71537803, 71537938], [71538154, 71538231], [71542477, 71542560], [71544139, 71544248], [71544338, 71544391], [71546622, 71546678]]
ENST00000487510	[[71530725, 71530820], [71532458, 71532617], [71534958, 71535283]]	None
ENST00000479947	[[71530736, 71530820], [71531360, 71531435], [71532458, 71532769]]	None
ENST00000473260	[[71530769, 71530820], [71532458, 71532889]]	None
NM_005455	[[71528973, 71530820], [71531360, 71531435], [71532458, 71532617], [71534958, 71535045], [71536509, 71536679], [71537803, 71537938], [71538154, 71538231], [71542477, 71542560], [71544139, 71544248], [71544338, 71544391], [71546622, 71546972]]	[[71531401, 71531435], [71532458, 71532617], [71534958, 71535045], [71536509, 71536679], [71537803, 71537938], [71538154, 71538231], [71542477, 71542560], [71544139, 71544248], [71544338, 71544391], [71546622, 71546678]]
NM_203350	[[71528973, 71530820], [71532458, 71532617], [71534958, 71535045], [71536509, 71536679], [71537803, 71537938], [71538154, 71538231], [71542477, 71542560], [71544139, 71544248], [71544338, 71544391], [71546622, 71546972]]	[[71530756, 71530820], [71532458, 71532617], [71534958, 71535045], [71536509, 71536679], [71537803, 71537938], [71538154, 71538231], [71542477, 71542560], [71544139, 71544248], [71544338, 71544391], [71546622, 71546678]]

Promoter

Chrom	Start	End	Description
chr1	71546690	71546730	CAGE_peak_1_at_ZRANB2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I070243	70243334	70243783	0.43	[{'connected_gene': 'ZRANB2', 'score': 9.43}, {'connected_gene': 'MIR186', 'score': 9.43}, {'connected_gene': 'GC01P070230', 'score': 0.39}, {'connected_gene': 'SRSF11', 'score': 0.28}, {'connected_gene': 'GC01M070275', 'score': 0.23}]
chr1	GH01I070459	70459663	70460223	0.73	[{'connected_gene': 'ZRANB2', 'score': 14.6}, {'connected_gene': 'LOC105378793', 'score': 0.39}, {'connected_gene': 'GC01M070473', 'score': 0.37}]
chr1	GH01I070203	70203749	70208011	2.28	[{'connected_gene': 'SRSF11', 'score': 596.09}, {'connected_gene': 'LRRC40', 'score': 556.43}, {'connected_gene': 'ZRANB2', 'score': 11.5}, {'connected_gene': 'ENSG00000228988', 'score': 0.37}]
chr1	GH01I071034	71034224	71035501	0.2	[{'connected_gene': 'PTGER3', 'score': 35.45}, {'connected_gene': 'ZRANB2', 'score': 5.64}, {'connected_gene': 'ZRANB2-AS1', 'score': 0.39}, {'connected_gene': 'GC01M071006', 'score': 0.31}]
chr1	GH01I071026	71026743	71029699	0.46	[{'connected_gene': 'PTGER3', 'score': 34.86}, {'connected_gene': 'ENSG00000235782', 'score': 11.32}, {'connected_gene': 'MIR186', 'score': 10.76}, {'connected_gene': 'ZRANB2', 'score': 10.71}, {'connected_gene': 'ZRANB2-AS1', 'score': 0.37}, {'connected_gene': 'GC01M071006', 'score': 0.34}]
chr1	GH01I071029	71029913	71034199	0.2	[{'connected_gene': 'PTGER3', 'score': 34.86}, {'connected_gene': 'MIR186', 'score': 10.77}, {'connected_gene': 'ZRANB2', 'score': 10.74}, {'connected_gene': 'ENSG00000235782', 'score': 10.59}, {'connected_gene': 'ZRANB2-AS1', 'score': 0.39}, {'connected_gene': 'GC01M071006', 'score': 0.34}]
chr1	GH01I070674	70674926	70676576	0.96	[{'connected_gene': 'PTGER3', 'score': 17.97}, {'connected_gene': 'ZRANB2-AS1', 'score': 11.24}, {'connected_gene': 'MIR186', 'score': 10.19}, {'connected_gene': 'ZRANB2', 'score': 10.19}, {'connected_gene': 'CASP3P1', 'score': 0.39}, {'connected_gene': 'LINC01788', 'score': 0.29}]
chr1	GH01I071011	71011355	71012888	0.31	[{'connected_gene': 'PTGER3', 'score': 21.46}, {'connected_gene': 'ZRANB2-AS1', 'score': 11.16}, {'connected_gene': 'MIR186', 'score': 10.43}, {'connected_gene': 'ZRANB2', 'score': 10.41}, {'connected_gene': 'GC01M071006', 'score': 0.77}]
chr1	GH01I071016	71016487	71023632	0.43	[{'connected_gene': 'PTGER3', 'score': 47.41}, {'connected_gene': 'ZRANB2-AS1', 'score': 13.25}, {'connected_gene': 'ENSG00000235782', 'score': 11.34}, {'connected_gene': 'MIR186', 'score': 11.05}, {'connected_gene': 'ZRANB2', 'score': 11.01}, {'connected_gene': 'GC01M071006', 'score': 0.39}]
chr1	GH01I071014	71014369	71014633	0.42	[{'connected_gene': 'MIR186', 'score': 10.44}, {'connected_gene': 'ZRANB2', 'score': 10.41}, {'connected_gene': 'GC01M071006', 'score': 0.44}, {'connected_gene': 'PTGER3', 'score': 0.29}, {'connected_gene': 'ZRANB2-AS1', 'score': 0.29}]
chr1	GH01I070409	70409496	70412968	2.3	[{'connected_gene': 'CTH', 'score': 565.78}, {'connected_gene': 'SRSF11', 'score': 23.69}, {'connected_gene': 'HHLA3', 'score': 21.1}, {'connected_gene': 'ZRANB2', 'score': 17.41}, {'connected_gene': 'ANKRD13C', 'score': 17.37}, {'connected_gene': 'ENSG00000278636', 'score': 0.37}]
chr1	GH01I071079	71079411	71082124	2.07	[{'connected_gene': 'ZRANB2-AS2', 'score': 550.77}, {'connected_gene': 'ZRANB2', 'score': 550.77}, {'connected_gene': 'SRSF11', 'score': 24.11}, {'connected_gene': 'PTGER3', 'score': 4.78}, {'connected_gene': 'MIR186', 'score': 0.39}]