PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr16	48125119	48125137	CAGE_peak_1_at_ABCC12_5end
chr16	48189898	48189909	CAGE_peak_4_at_ABCC12_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I048121	48121900	48124961	1.04	[{'connected_gene': 'ABCC12', 'score': 11.7}, {'connected_gene': 'LONP2', 'score': 5.68}, {'connected_gene': 'ENSG00000261017', 'score': 0.21}]
chr16	GH16I048156	48156601	48157175	0.98	[{'connected_gene': 'ABCC12', 'score': 550.77}, {'connected_gene': 'LONP2', 'score': 5.98}, {'connected_gene': 'ENSG00000261538', 'score': 0.39}]
chr16	GH16I048117	48117570	48117739	0.75	[{'connected_gene': 'ABCC12', 'score': 11.44}, {'connected_gene': 'NETO2', 'score': 10.8}, {'connected_gene': 'ENSG00000261017', 'score': 0.22}]
chr16	GH16I048125	48125450	48128582	0.9	[{'connected_gene': 'ABCC12', 'score': 0.31}, {'connected_gene': 'ENSG00000261017', 'score': 0.2}]
chr16	GH16I048158	48158410	48158579	0.77	[{'connected_gene': 'LONP2', 'score': 6.97}, {'connected_gene': 'ABCC12', 'score': 0.77}, {'connected_gene': 'ENSG00000261538', 'score': 0.44}]
chr16	GH16I048075	48075237	48077239	0.81	[{'connected_gene': 'ITFG1', 'score': 6.53}, {'connected_gene': 'ENSG00000261017', 'score': 0.37}, {'connected_gene': 'ABCC12', 'score': 0.18}]
chr16	GH16I048081	48081338	48082472	0.52	[{'connected_gene': 'ENSG00000261017', 'score': 0.34}, {'connected_gene': 'ABCC12', 'score': 0.19}]
chr16	GH16I048164	48164732	48166495	1.14	[{'connected_gene': 'ENSG00000261538', 'score': 550.77}, {'connected_gene': 'LONP2', 'score': 5.41}, {'connected_gene': 'ABCC12', 'score': 0.44}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000311303	[[48116883, 48117712], [48117819, 48117984], [48119503, 48119617], [48120651, 48120730], [48121836, 48121996], [48122455, 48122645], [48125030, 48125120], [48130656, 48130813], [48134782, 48134920], [48138052, 48138279], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145488, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174827], [48175112, 48175264], [48177820, 48177976], [48180216, 48180681]]	[[48117625, 48117712], [48117819, 48117984], [48119503, 48119617], [48120651, 48120730], [48121836, 48121996], [48122455, 48122645], [48125030, 48125120], [48130656, 48130813], [48134782, 48134920], [48138052, 48138279], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145488, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174827], [48175112, 48175264], [48177820, 48177976], [48180216, 48180335]]
ENST00000534418	[[48117257, 48117712], [48117819, 48117984], [48119503, 48119617], [48121836, 48121996], [48122455, 48122645], [48125030, 48125120], [48130656, 48130843], [48134782, 48134920], [48138052, 48138279], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145488, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180561]]	[[48130842, 48130843], [48134782, 48134920], [48138052, 48138279], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145488, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180335]]
ENST00000529084	[[48117257, 48117712], [48117819, 48117984], [48119503, 48119617], [48121836, 48121996], [48122455, 48122645], [48125030, 48125120], [48130656, 48130843], [48134782, 48134920], [48138052, 48138279], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145497, 48145573], [48145686, 48145821], [48149325, 48149529], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180385], [48187526, 48187795], [48189751, 48189929]]	[[48149339, 48149529], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180335]]
ENST00000416054	[[48117606, 48117712], [48117819, 48117984], [48119503, 48119617], [48120651, 48120730], [48121836, 48121996], [48122455, 48122645], [48125030, 48125120], [48130656, 48130843], [48134782, 48134920], [48138052, 48138279], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145497, 48145573], [48145686, 48145821], [48149325, 48149529], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180341]]	[[48149339, 48149529], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180335]]
ENST00000529504	[[48117606, 48117712], [48117819, 48117984], [48119503, 48119617], [48120651, 48120730], [48121850, 48121996], [48122455, 48122645], [48125030, 48125120], [48130656, 48130843], [48134782, 48134920], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145497, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180341]]	[[48130837, 48130843], [48134782, 48134920], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145497, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180335]]
ENST00000497206	[[48117606, 48117712], [48117819, 48117984], [48119503, 48119617], [48121836, 48121996], [48122455, 48122645], [48125030, 48125120], [48130656, 48130843], [48134782, 48134920], [48138052, 48138279], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145497, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180341]]	[[48130842, 48130843], [48134782, 48134920], [48138052, 48138279], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145497, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180335]]
ENST00000448542	[[48117606, 48117712], [48117819, 48117984], [48119503, 48119617], [48120651, 48120730], [48121836, 48121996], [48122455, 48122645], [48125030, 48125120], [48130656, 48130843], [48134782, 48134920], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145497, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180341]]	[[48130837, 48130843], [48134782, 48134920], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145497, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180335]]
ENST00000532494	[[48117606, 48117712], [48117819, 48117984], [48119503, 48119617], [48121850, 48121996], [48122455, 48122645], [48125030, 48125120], [48130656, 48130843], [48134782, 48134920], [48138052, 48138279], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145497, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180341]]	[[48130842, 48130843], [48134782, 48134920], [48138052, 48138279], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145497, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180335]]
ENST00000532355	[[48117965, 48117984], [48119503, 48119617], [48120102, 48120551]]	None
ENST00000526251	[[48121076, 48121996], [48122455, 48122645], [48125030, 48125149]]	None
ENST00000533185	[[48145358, 48145573], [48145686, 48145821], [48149325, 48149344]]	None
ENST00000528693	[[48155150, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180385], [48189751, 48189904]]	None
ENST00000533639	[[48167679, 48167746], [48172138, 48172286], [48173098, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180385], [48189751, 48189904]]	[[48172234, 48172286], [48173098, 48173247], [48174597, 48174831], [48175116, 48175264], [48177820, 48177976], [48180216, 48180335]]
ENST00000527640	[[48175221, 48175264], [48177820, 48177976], [48180216, 48180385], [48189728, 48189904]]	[[48175221, 48175264], [48177820, 48177976], [48180216, 48180335]]
NM_033226	[[48116883, 48117712], [48117819, 48117984], [48119503, 48119617], [48120651, 48120730], [48121836, 48121996], [48122455, 48122645], [48125030, 48125120], [48130656, 48130813], [48134782, 48134920], [48138052, 48138279], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145488, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174827], [48175112, 48175264], [48177820, 48177976], [48180216, 48180681]]	[[48117625, 48117712], [48117819, 48117984], [48119503, 48119617], [48120651, 48120730], [48121836, 48121996], [48122455, 48122645], [48125030, 48125120], [48130656, 48130813], [48134782, 48134920], [48138052, 48138279], [48139049, 48139247], [48141232, 48141336], [48142350, 48142440], [48145346, 48145418], [48145488, 48145573], [48145686, 48145821], [48149325, 48149529], [48151171, 48151244], [48155626, 48155751], [48158123, 48158195], [48162369, 48162648], [48164698, 48164806], [48167597, 48167746], [48172138, 48172286], [48173073, 48173247], [48174597, 48174827], [48175112, 48175264], [48177820, 48177976], [48180216, 48180335]]