PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000296839	[[1312674, 1314992]]	[[1312939, 1314151]]
NM_033260	[[1312674, 1314993]]	[[1312939, 1314151]]

Promoter

Chrom	Start	End	Description
chr6	1312155	1312187	CAGE_peak_2_at_FOXQ1_5end
chr6	1312325	1312340	CAGE_peak_1_at_FOXQ1_5end
chr6	1312688	1312701	CAGE_peak_3_at_FOXQ1_5end
chr6	1312753	1312800	CAGE_peak_4_at_FOXQ1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I001309	1309797	1318441	2.42	[{'connected_gene': 'FOXQ1', 'score': 550.77}, {'connected_gene': 'EXOC2', 'score': 15.71}, {'connected_gene': 'LOC105374880', 'score': 5.13}, {'connected_gene': 'GC06M001309', 'score': 0.77}, {'connected_gene': 'LINC01394', 'score': 0.44}]
chr6	GH06I001885	1885601	1885800	0.72	[{'connected_gene': 'FOXQ1', 'score': 5.43}, {'connected_gene': 'PIR38406', 'score': 0.39}, {'connected_gene': 'GC06P001857', 'score': 0.31}, {'connected_gene': 'GMDS', 'score': 0.05}]
chr6	GH06I001198	1198934	1202618	0.49	[{'connected_gene': 'FOXQ1', 'score': 6.03}, {'connected_gene': 'FOXF2', 'score': 4.93}, {'connected_gene': 'GC06P001197', 'score': 0.77}, {'connected_gene': 'GC06P001205', 'score': 0.44}]
chr6	GH06I001285	1285401	1288337	0.89	[{'connected_gene': 'FOXQ1', 'score': 13.93}, {'connected_gene': 'GC06M001274', 'score': 0.39}, {'connected_gene': 'LOC105374879', 'score': 0.37}]
chr6	GH06I001226	1226273	1232588	0.96	[{'connected_gene': 'FOXQ1', 'score': 7.59}, {'connected_gene': 'GC06M001234', 'score': 0.44}, {'connected_gene': 'GC06P001205', 'score': 0.34}]
chr6	GH06I001608	1608859	1614727	2.43	[{'connected_gene': 'FOXC1', 'score': 558.8}, {'connected_gene': 'GC06P001611', 'score': 550.77}, {'connected_gene': 'GC06P001612', 'score': 550.77}, {'connected_gene': 'FOXQ1', 'score': 4.48}]
chr6	GH06I001321	1321370	1323375	0.91	[{'connected_gene': 'LINC01394', 'score': 550.77}, {'connected_gene': 'FOXQ1', 'score': 0.44}]
chr6	GH06I001056	1055615	1055891	0.66	[{'connected_gene': 'GC06M001056', 'score': 550.77}, {'connected_gene': 'FOXQ1', 'score': 5.48}, {'connected_gene': 'GC06P001048', 'score': 0.44}, {'connected_gene': 'LINC01622', 'score': 0.25}]
chr6	GH06I001080	1080186	1083083	0.52	[{'connected_gene': 'ENSG00000176515', 'score': 550.77}, {'connected_gene': 'ENSG00000270937', 'score': 10.02}, {'connected_gene': 'FOXQ1', 'score': 6.79}, {'connected_gene': 'GC06P001095', 'score': 0.39}, {'connected_gene': 'LINC01622', 'score': 0.37}]
chr6	GH06I001898	1898052	1900419	0.52	[{'connected_gene': 'PIR38406', 'score': 550.77}, {'connected_gene': 'FOXQ1', 'score': 5.64}, {'connected_gene': 'GC06P001857', 'score': 0.26}, {'connected_gene': 'GMDS', 'score': 0.05}]