PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr3	52017283	52017310	CAGE_peak_2_at_ACY1_5end
chr3	52017352	52017364	CAGE_peak_4_at_ACY1_5end
chr3	52017454	52017572	CAGE_peak_1_at_ACY1_5end
chr3	52020178	52020227	CAGE_peak_3_at_ACY1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I051980	51980789	51987619	2.27	[{'connected_gene': 'ABHD14B', 'score': 550.77}, {'connected_gene': 'ACY1', 'score': 550.77}, {'connected_gene': 'GPR62', 'score': 15.16}, {'connected_gene': 'PARP3', 'score': 7.59}, {'connected_gene': 'RPL29', 'score': 5.93}, {'connected_gene': 'ABHD14A-ACY1', 'score': 0.44}, {'connected_gene': 'ABHD14A', 'score': 0.39}]
chr3	GH03I051973	51973200	51977017	2.24	[{'connected_gene': 'PCBP4', 'score': 550.77}, {'connected_gene': 'ABHD14A-ACY1', 'score': 550.77}, {'connected_gene': 'ABHD14A', 'score': 550.77}, {'connected_gene': 'ENSG00000272762', 'score': 550.77}, {'connected_gene': 'PARP3', 'score': 7.64}, {'connected_gene': 'NT5DC2', 'score': 5.33}, {'connected_gene': 'ACY1', 'score': 0.44}, {'connected_gene': 'ABHD14B', 'score': 0.44}]
chr3	GH03I052153	52153156	52155774	2.06	[{'connected_gene': 'POC1A', 'score': 550.77}, {'connected_gene': 'PBRM1', 'score': 14.13}, {'connected_gene': 'RRP9', 'score': 11.16}, {'connected_gene': 'DUSP7', 'score': 10.86}, {'connected_gene': 'ABHD14A-ACY1', 'score': 10.5}, {'connected_gene': 'ABHD14B', 'score': 10.5}, {'connected_gene': 'PCBP4', 'score': 10.49}, {'connected_gene': 'ACY1', 'score': 10.07}, {'connected_gene': 'WDR82', 'score': 9.96}, {'connected_gene': 'GPR62', 'score': 9.76}, {'connected_gene': 'LINC00696', 'score': 0.17}]
chr3	GH03I052044	52044628	52058616	2.78	[{'connected_gene': 'DUSP7', 'score': 561.07}, {'connected_gene': 'DCAF1', 'score': 24.9}, {'connected_gene': 'GPR62', 'score': 23.38}, {'connected_gene': 'RAD54L2', 'score': 19.36}, {'connected_gene': 'PHF7', 'score': 14.38}, {'connected_gene': 'NT5DC2', 'score': 13.65}, {'connected_gene': 'RPL29', 'score': 12.2}, {'connected_gene': 'PCBP4', 'score': 10.99}, {'connected_gene': 'WDR82', 'score': 10.3}, {'connected_gene': 'SFMBT1', 'score': 10.08}, {'connected_gene': 'NISCH', 'score': 9.77}, {'connected_gene': 'TWF2', 'score': 1.92}, {'connected_gene': 'ACY1', 'score': 1.61}, {'connected_gene': 'LOC105377089', 'score': 0.44}]
chr3	GH03I051977	51977525	51977674	0.2	[{'connected_gene': 'ABHD14A-ACY1', 'score': 0.77}, {'connected_gene': 'ABHD14B', 'score': 0.44}, {'connected_gene': 'ACY1', 'score': 0.44}, {'connected_gene': 'ABHD14A', 'score': 0.44}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000458031	[[52009065, 52009220], [52011886, 52012098], [52012274, 52012390], [52018062, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023199]]	[[52011962, 52012098], [52012274, 52012390], [52018062, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023091]]
ENST00000496679	[[52017355, 52017605], [52018062, 52018417]]	None
ENST00000494103	[[52017458, 52017605], [52018062, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019913], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023213]]	[[52018080, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019913], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023091]]
ENST00000476854	[[52017458, 52017605], [52018062, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023213]]	[[52018080, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023091]]
ENST00000476351	[[52017458, 52017605], [52018062, 52018174], [52019416, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023213]]	[[52018080, 52018174], [52019416, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023091]]
ENST00000491318	[[52017458, 52017605], [52018062, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023213]]	[[52018080, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021324, 52021347]]
ENST00000404366	[[52017477, 52017605], [52018062, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023162]]	[[52018080, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023091]]
ENST00000465121	[[52017550, 52017605], [52018062, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52022246]]	None
ENST00000469863	[[52017552, 52017605], [52018062, 52018174], [52019222, 52019287], [52019349, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077]]	[[52018080, 52018174], [52019222, 52019287], [52019349, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077]]
ENST00000468068	[[52018860, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020297]]	None
ENST00000464587	[[52020225, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021470]]	None
ENST00000490244	[[52022317, 52022842], [52022926, 52022996]]	None
NM_001198895	[[52017299, 52017600], [52018062, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023218]]	[[52018080, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023091]]
NM_001198898	[[52017299, 52017605], [52018062, 52018174], [52019416, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023218]]	[[52018080, 52018174], [52019416, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023091]]
NM_001198896	[[52017299, 52017605], [52018062, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019913], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023218]]	[[52018080, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019913], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023091]]
NM_001198897	[[52017299, 52017605], [52018062, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023218]]	[[52018080, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023091]]
NM_000666	[[52017299, 52017605], [52018062, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023218]]	[[52018080, 52018174], [52019222, 52019287], [52019376, 52019481], [52019867, 52019962], [52020270, 52020347], [52020430, 52020520], [52020620, 52020677], [52021003, 52021077], [52021162, 52021212], [52021324, 52021469], [52021571, 52021640], [52022539, 52022619], [52022781, 52022842], [52022926, 52023091]]