PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000342944	[[24216275, 24216423], [24228985, 24229081], [24309055, 24312643]]	[[24309057, 24310782]]
ENST00000594886	[[24269977, 24270139], [24274702, 24274817], [24288741, 24288868], [24289349, 24289445], [24309055, 24309347]]	[[24270109, 24270139], [24274702, 24274817], [24288741, 24288758]]
ENST00000339642	[[24269985, 24270139], [24288741, 24288868], [24289349, 24289445], [24290017, 24290151]]	[[24270109, 24270139], [24288741, 24288868], [24289349, 24289445], [24290017, 24290040]]
ENST00000357002	[[24269994, 24270139], [24288741, 24288868], [24289349, 24289445], [24309055, 24312654]]	[[24270109, 24270139], [24288741, 24288868], [24289349, 24289445], [24309055, 24310782]]
ENST00000595187	[[24270054, 24270139], [24274702, 24274817], [24286548, 24286669], [24288741, 24288868], [24289349, 24289445], [24309055, 24309122]]	[[24270109, 24270139], [24274702, 24274817], [24286548, 24286631]]
ENST00000593783	[[24286987, 24290154]]	None
NM_001278663	[[24216206, 24216423], [24228985, 24229081], [24309055, 24312770]]	[[24309057, 24310782]]
NM_001278661	[[24216206, 24216423], [24228985, 24229081], [24288741, 24288868], [24289349, 24289445], [24309055, 24312770]]	[[24288834, 24288868], [24289349, 24289445], [24309055, 24310782]]
NM_001278677	[[24216206, 24216423], [24228985, 24229081], [24232278, 24232350], [24288741, 24288868], [24289349, 24289445], [24309055, 24312770]]	[[24288834, 24288868], [24289349, 24289445], [24309055, 24310782]]
NM_001278665	[[24269961, 24270139], [24288741, 24288868], [24289349, 24289445], [24290017, 24290154]]	[[24270109, 24270139], [24288741, 24288868], [24289349, 24289445], [24290017, 24290040]]
NM_001278678	[[24269961, 24270139], [24309055, 24312770]]	[[24309057, 24310782]]
NM_001278664	[[24269961, 24270139], [24289349, 24289445], [24309055, 24312770]]	[[24289411, 24289445], [24309055, 24310782]]
NM_203282	[[24269961, 24270139], [24288741, 24288868], [24289349, 24289445], [24309055, 24312770]]	[[24270109, 24270139], [24288741, 24288868], [24289349, 24289445], [24309055, 24310782]]
NM_001278662	[[24269961, 24270139], [24274702, 24274817], [24288741, 24288868], [24289349, 24289445], [24309055, 24312770]]	[[24288834, 24288868], [24289349, 24289445], [24309055, 24310782]]

Promoter

Chrom	Start	End	Description
chr19	24216201	24216212	CAGE_peak_4_at_ZNF254_5end
chr19	24216213	24216314	CAGE_peak_1_at_ZNF254_5end
chr19	24216327	24216345	CAGE_peak_5_at_ZNF254_5end
chr19	24216347	24216356	CAGE_peak_7_at_ZNF254_5end
chr19	24269949	24269969	CAGE_peak_3_at_ZNF254_5end
chr19	24269971	24269980	CAGE_peak_6_at_ZNF254_5end
chr19	24269981	24270007	CAGE_peak_2_at_ZNF254_5end
chr19	24270027	24270034	CAGE_peak_8_at_ZNF254_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr19	GH19I024086	24086398	24088600	1.91	[{'connected_gene': 'ZNF254', 'score': 550.23}, {'connected_gene': 'ENSG00000279425', 'score': 0.44}, {'connected_gene': 'BNIP3P40', 'score': 0.39}]
chr19	GH19I023824	23824039	23824248	0.75	[{'connected_gene': 'ZNF254', 'score': 10.68}, {'connected_gene': 'GC19P023828', 'score': 0.77}, {'connected_gene': 'BNIP3P39', 'score': 0.34}, {'connected_gene': 'ENSG00000267924', 'score': 0.23}, {'connected_gene': 'ENSG00000233836', 'score': 0.21}, {'connected_gene': 'RPSAP58', 'score': 0.21}]
chr19	GH19I024047	24047548	24047607	0.61	[{'connected_gene': 'ZNF254', 'score': 550.39}, {'connected_gene': 'ENSG00000268362', 'score': 0.39}, {'connected_gene': 'GC19M024028', 'score': 0.39}, {'connected_gene': 'GC19P024019', 'score': 0.29}, {'connected_gene': 'ENSG00000279425', 'score': 0.29}]
chr19	GH19I024032	24032513	24035368	2.24	[{'connected_gene': 'ZNF254', 'score': 552.1}, {'connected_gene': 'ENSG00000268362', 'score': 550.77}, {'connected_gene': 'GC19P024035', 'score': 550.77}, {'connected_gene': 'GC19M024028', 'score': 0.77}, {'connected_gene': 'GC19P024019', 'score': 0.37}]
chr19	GH19I023685	23685118	23688172	1.98	[{'connected_gene': 'ZNF675', 'score': 565.25}, {'connected_gene': 'ZNF91', 'score': 19.32}, {'connected_gene': 'ENSG00000233836', 'score': 19.13}, {'connected_gene': 'ENSG00000268362', 'score': 18.72}, {'connected_gene': 'ZNF254', 'score': 15.82}, {'connected_gene': 'BNIP3P40', 'score': 10.46}, {'connected_gene': 'GC19P023634', 'score': 0.23}]
chr19	GH19I024075	24075679	24075828	0.52	[{'connected_gene': 'ENSG00000279425', 'score': 0.77}, {'connected_gene': 'GC19M024028', 'score': 0.28}, {'connected_gene': 'ZNF254', 'score': 0.26}]
chr19	GH19I024077	24077676	24079211	0.31	[{'connected_gene': 'ENSG00000279425', 'score': 550.77}, {'connected_gene': 'ZNF254', 'score': 12.65}, {'connected_gene': 'GC19M024028', 'score': 0.26}]