PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
H2AFX	1	HIST2H2BE	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Du YC (2006), Du YC (2006), Lee HS (2010)	3
SGO1	2	CHD1L	5	affinity chromatography technology	Hein MY (2015)	1
FOXP1	23	CHD1L	5	affinity chromatography technology	Li X (2015)	1
CDC5L	2	PRKDC	12	affinity chromatography technology, biochemical, affinity chromatography technology	Ajuh P (2000), Ajuh P (2000), Lleres D (2010)	3
EGLN3	0	CIAO1	3	affinity chromatography technology	Rodriguez J (2016)	1
PLK1	0	CHD1L	5	affinity chromatography technology	Hein MY (2015)	1
XPC	1	H2AFX	1	affinity chromatography technology, affinity chromatography technology	Ray A (2009), Huttlin EL (2017)	2
RNF146	4	TNKS	12	pull down	DaRosa PA (2014)	1
RPA1	0	XRCC5	5	affinity chromatography technology	Marechal A (2014)	1
CHD1L	5	XPC	1	affinity chromatography technology	Huttlin EL (2017)	1
RPA3	2	RPA2	0	biochemical, x-ray crystallography, biochemical, two hybrid, affinity chromatography technology, biochemical, affinity chromatography technology	Bochkareva E (1998), Bochkareva E (2002), Havugimana PC (2012), Du Y (2009), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	7
RPA2	0	PARP2	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NTRK1	1	7515	0	affinity chromatography technology	Emdal KB (2015)	1
LRRK2	5	PRKDC	12	affinity chromatography technology, affinity chromatography technology	Daechsel JC (2007), Sen S (2009)	2
GLMP	0	CHD1L	5	affinity chromatography technology	Huttlin EL (2017)	1
PARP1	3	APLF	3	pull down, pull down, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kanno S (2007), Kanno S (2007), Eustermann S (2010), Ahel I (2008), Huttlin EL (2015), Gibbs-Seymour I (2016), Huttlin EL (2017)	7
RNF166	0	CHD1L	5	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RNF166	0	TNKS2	6	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PARP1	3	XRCC5	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, enzymatic study, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Ju BG (2006), Galande S (1999), Galande S (1999), Galande S (1999), Idogawa M (2007), Li B (2004), Li B (2004), Yin H (2006), Yin H (2006), Sand-Dejmek J (2011), Wu T (2013)	11
BAALC	0	CHD1L	5	two hybrid	Morita K (2015)	1
RNF146	4	SSRP1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SNW1	0	XRCC6	3	affinity chromatography technology	Lleres D (2010)	1
PRKDC	12	RPA2	0	affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, enzymatic study, enzymatic study, affinity chromatography technology, enzymatic study	Shao RG (1999), Shao RG (1999), Shao RG (1999), Wu X (2006), Zernik-Kobak M (1997), Chan DW (2000), Marechal A (2014), Fried LM (1996)	8
RPA1	0	RPA2	0	affinity chromatography technology, x-ray crystallography, affinity chromatography technology, biochemical, biochemical, two hybrid, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Shao RG (1999), Bochkareva E (2002), Gong Z (2011), Havugimana PC (2012), Kristensen AR (2012), Ghospurkar PL (2014), Huttlin EL (2015), Wan C (2015), Hein MY (2015), Elia AE (2015), Elia AE (2015), Huttlin EL (2017), Feeney L (2017)	13
CDC5L	2	PLK1	0	affinity chromatography technology	Lleres D (2010)	1
SGO1	2	PLK1	0	affinity chromatography technology	Wang X (2008)	1
CHD1L	5	EIF4A1	3	affinity chromatography technology	Ahel D (2009)	1
CHD1L	5	HIST1H2BB	3	affinity chromatography technology	Gottschalk AJ (2009)	1
SNW1	0	HLTF	7	affinity chromatography technology	Lleres D (2010)	1
CHD1L	5	SCYL1	5	two hybrid	Wang J (2011)	1
TEAD2	2	CHD1L	5	affinity chromatography technology	Li X (2015)	1
SNW1	0	API5	0	affinity chromatography technology	Lleres D (2010)	1
CHD1L	5	RPA2	0	affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Ahel D (2009)	2
HIF1AN	0	CHD1L	5	affinity chromatography technology	Rodriguez J (2016)	1
H2AFX	1	CBX5	3	affinity chromatography technology	Dittmann K (2011)	1
KLK5	1	CHD1L	5	affinity chromatography technology	Huttlin EL (2015)	1
RPA1	0	HNRNPL	3	affinity chromatography technology	Marechal A (2014)	1
LRRK2	5	HSPA8	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wang L (2008), Sen S (2009), Daechsel JC (2007), Rudenko IN (2017)	4
EGLN3	0	CHD1L	5	affinity chromatography technology	Rodriguez J (2016)	1
HIST1H2BA	0	PARP1	3	pull down, affinity chromatography technology, affinity chromatography technology	Messner S (2010), Huttlin EL (2015), Huttlin EL (2017)	3
SNW1	0	CDC5L	2	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Zhang C (2003), Wan C (2015), Lleres D (2010), Lleres D (2010)	4
NTRK1	1	SRPK2	1	affinity chromatography technology	Emdal KB (2015)	1
APLF	3	SUPT16H	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RPA2	0	XRCC6	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Shao RG (1999), Shao RG (1999), Marechal A (2014), Wan C (2015)	4
CHD1L	5	TRIM33	4	affinity chromatography technology, affinity chromatography technology, imaging technique	Kulkarni A (2013), Kulkarni A (2013), Kulkarni A (2013)	3
NTRK1	1	HNRNPL	3	affinity chromatography technology	Emdal KB (2015)	1
ID1	0	CHD1L	5	affinity chromatography technology	Hein MY (2015)	1
APLF	3	XRCC6	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Gibbs-Seymour I (2016), Huttlin EL (2017)	3
8339	0	SGO1	2	bioid	Lambert JP (2015)	1
CHD1L	5	SSRP1	1	affinity chromatography technology	Huttlin EL (2017)	1
HIF1AN	0	TNKS	12	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Rodriguez J (2016)	2
RNF146	4	CHD1L	5	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NTRK1	1	EIF4A1	3	affinity chromatography technology	Emdal KB (2015)	1
FOXL1	0	CHD1L	5	affinity chromatography technology	Li X (2015)	1
CHD1L	5	RPA3	2	affinity chromatography technology	Gottschalk AJ (2009)	1
CBX1	0	XRCC6	3	affinity chromatography technology	Rosnoblet C (2011)	1
FOXB1	1	RPA3	2	affinity chromatography technology	Li X (2015)	1
CBX1	0	CBX3	1	affinity chromatography technology, affinity chromatography technology, pull down, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nielsen AL (2001), Nielsen AL (2001), Nielsen AL (2001), Nielsen AL (2001), Mateos-Langerak J (2007), Rosnoblet C (2011), Hauri S (2016), Hauri S (2016)	8
PRKDC	12	XRCC6	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, enzymatic study, enzymatic study, affinity chromatography technology	Shao RG (1999), Drouet J (2005), Gottlieb TM (1993), Shamanna RA (2011), Shamanna RA (2011), Havugimana PC (2012), Sartorius CA (2000), Sartorius CA (2000), Hein MY (2015)	9
PARP1	3	SUPT16H	4	enzymatic study	Huang JY (2006)	1
XRCC6	3	XPC	1	affinity chromatography technology	Huttlin EL (2017)	1
RPA2	0	SSRP1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NTRK1	1	PRKDC	12	affinity chromatography technology	Emdal KB (2015)	1
FAS	2	CHD1L	5	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HNRNPL	3	XRCC5	5	affinity chromatography technology	Fei T (2017)	1
PARP1	3	7515	0	affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gueven N (2004), Gueven N (2004), Masson M (1998), Masson M (1998), Cazzalini O (2010), Lee CH (2010), Leppard JB (2003)	7
EGLN3	0	PRKDC	12	affinity chromatography technology	Rodriguez J (2016)	1
HNRNPL	3	FOXP1	23	affinity chromatography technology	Fei T (2017)	1
APLF	3	PARP2	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CHD1L	5	RFC2	0	affinity chromatography technology	Ahel D (2009)	1
RPA2	0	HSPA8	4	affinity chromatography technology	Marechal A (2014)	1
NTRK1	1	CDC5L	2	affinity chromatography technology	Emdal KB (2015)	1
CDC5L	2	CHD1L	5	affinity chromatography technology	Lleres D (2010)	1
CHD1L	5	NR4A1	4	two hybrid	Wang J (2011)	1
RPA3	2	XRCC6	3	affinity chromatography technology	Marechal A (2014)	1
RPA1	0	XRCC6	3	affinity chromatography technology	Marechal A (2014)	1
RNF146	4	XPC	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RNF146	4	PARP1	3	affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology	Kang HC (2011), Kang HC (2011), Kang HC (2011), Kang HC (2011), Huttlin EL (2015), Huttlin EL (2017)	6
PRKDC	12	7515	0	affinity chromatography technology, affinity chromatography technology	Toulany M (2008), Toulany M (2008)	2
RPA2	0	RFC2	0	affinity chromatography technology	Marechal A (2014)	1
RPA1	0	7515	0	affinity chromatography technology, affinity chromatography technology	Marechal A (2014), Elia AE (2015)	2
CHD1L	5	CBX3	1	affinity chromatography technology	Ahel D (2009)	1
XPC	1	PARP1	3	affinity chromatography technology	Huttlin EL (2017)	1
XRCC6	3	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
CHD1L	5	H2AFZ	1	affinity chromatography technology	Gottschalk AJ (2009)	1
CDC5L	2	API5	0	affinity chromatography technology	Lleres D (2010)	1
RPA3	2	HSPA8	4	affinity chromatography technology	Marechal A (2014)	1
NTRK1	1	RPA1	0	affinity chromatography technology	Emdal KB (2015)	1
SSRP1	1	SUPT16H	4	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology	Birch JL (2009), Tan BC (2006), Tan BC (2006), Pavri R (2006), Huang JY (2006), Huang JY (2006), OConnell BC (2010), Havugimana PC (2012), Kristensen AR (2012), Wan C (2015), Huttlin EL (2017), Boldt K (2016)	12
NT5E	1	CHD1L	5	affinity chromatography technology	Huttlin EL (2015)	1
RNF146	4	XRCC5	5	affinity chromatography technology, affinity chromatography technology	Kang HC (2011), Kang HC (2011)	2
APLF	3	HLTF	7	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RPA2	0	SUPT16H	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
8339	0	7515	0	bioid	Lambert JP (2015)	1
RPA2	0	CDC5L	2	affinity chromatography technology, pull down	Marechal A (2014), Marechal A (2014)	2
HIST1H2BA	0	SSRP1	1	affinity chromatography technology, biochemical, affinity chromatography technology	Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	3
NTRK1	1	TRIM33	4	affinity chromatography technology	Emdal KB (2015)	1
SNW1	0	HSPA8	4	affinity chromatography technology	Lleres D (2010)	1
H2AFX	1	SSRP1	1	affinity chromatography technology, pull down, affinity chromatography technology	Du YC (2006), Heo K (2008), Huttlin EL (2017)	3
SRPK2	1	XRCC5	5	enzymatic study	Lipp JJ (2015)	1
SNW1	0	PLK1	0	affinity chromatography technology	Lleres D (2010)	1
SSRP1	1	HIST2H2BE	1	pull down	Winkler DD (2011)	1
HIST1H2BA	0	CHD1L	5	affinity chromatography technology	Huttlin EL (2015)	1
RPA3	2	PARP1	3	affinity chromatography technology	Marechal A (2014)	1
EGLN3	0	HSPA8	4	affinity chromatography technology	Rodriguez J (2016)	1
100132285	0	CHD1L	5	affinity chromatography technology	Huttlin EL (2015)	1
RPA2	0	7515	0	affinity chromatography technology, affinity chromatography technology	Marechal A (2014), Huttlin EL (2017)	2
CHD1L	5	CBX5	3	affinity chromatography technology	Ahel D (2009)	1
HIST1H2BA	0	APLF	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CHD1L	5	H2AFX	1	affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Huttlin EL (2017)	2
XRCC5	5	PRKDC	12	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, imaging technique, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, biochemical, affinity chromatography technology	Jin S (1997), Matheos D (2002), Gell D (1999), Drouet J (2005), Falck J (2005), Falck J (2005), Falck J (2005), Olsen BB (2012), Olsen BB (2012), Sand-Dejmek J (2011), Sartorius CA (2000), Sartorius CA (2000), Drouet J (2006), Drouet J (2006), Sibanda BL (2010), Wan C (2015), Hein MY (2015)	17
CHD1L	5	SUPT16H	4	affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Huttlin EL (2017)	2
NTRK1	1	SNW1	0	affinity chromatography technology	Emdal KB (2015)	1
CHD1L	5	HSPA8	4	affinity chromatography technology	Huttlin EL (2017)	1
NTRK1	1	SUPT16H	4	affinity chromatography technology	Emdal KB (2015)	1
RPA3	2	RFC2	0	affinity chromatography technology	Marechal A (2014)	1
CHD1L	5	TNKS2	6	affinity chromatography technology	Huttlin EL (2017)	1
CHD1L	5	PARP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Ahel D (2009), Brockschmidt A (2011), Kulkarni A (2013), Huttlin EL (2017)	5
HIST1H2BA	0	HLTF	7	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CHD1L	5	HLTF	7	affinity chromatography technology	Huttlin EL (2017)	1
NTRK1	1	HLTF	7	affinity chromatography technology	Emdal KB (2015)	1
CHD1L	5	RPA1	0	affinity chromatography technology	Ahel D (2009)	1
HIST1H2BA	0	PARP2	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
XRCC6	3	SSRP1	1	affinity chromatography technology	Huttlin EL (2017)	1
SNW1	0	RFC2	0	affinity chromatography technology	Lleres D (2010)	1
HIST1H2BA	0	7515	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
XRCC5	5	XRCC6	3	two hybrid, biochemical, two hybrid, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, enzymatic study, enzymatic study, x-ray crystallography, affinity chromatography technology, pull down, biochemical, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, imaging technique, affinity chromatography technology, affinity chromatography technology	Gell D (1999), Barlev NA (1998), Yang CR (1999), Singleton BK (1999), Song K (2000), Gell D (1999), Gell D (1999), Willis DM (2002), Willis DM (2002), Drouet J (2005), Drouet J (2005), Cohen HY (2004), Lan L (2010), Cooper MP (2000), Cooper MP (2000), Velma V (2010), Zheng Y (2011), Sucharov CC (2004), Sucharov CC (2004), Sibani S (2005), Sibani S (2005), Walker JR (2001), Nick McElhinny SA (2000), Nick McElhinny SA (2000), Sand-Dejmek J (2011), Sand-Dejmek J (2011), Sand-Dejmek J (2011), Pucci S (2009), Trougakos IP (2009), Havugimana PC (2012), Sartorius CA (2000), Sartorius CA (2000), Rivera-Calzada A (2007), Kelavkar UP (2001), Kelavkar UP (2001), Kristensen AR (2012), Kim E (2008), Wan C (2015), Hein MY (2015), Hein MY (2015), Nolens G (2009), Nolens G (2009), Nolens G (2009), Nolens G (2009), Huttlin EL (2017), Fantini D (2017)	46
NTRK1	1	HSPA8	4	affinity chromatography technology	Emdal KB (2015)	1
RPA1	0	PARP1	3	affinity chromatography technology	Marechal A (2014)	1
RPA2	0	HLTF	7	affinity chromatography technology, affinity chromatography technology	Marechal A (2014), Huttlin EL (2015)	2
XRCC6	3	SUPT16H	4	affinity chromatography technology	Huttlin EL (2017)	1
RPA2	0	PARP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Marechal A (2014), Huttlin EL (2015), Huttlin EL (2017)	3
HNRNPL	3	CHD1L	5	affinity chromatography technology	Fei T (2017)	1
XRCC6	3	7515	0	affinity chromatography technology	Huttlin EL (2017)	1
SNW1	0	PRKDC	12	affinity chromatography technology	Lleres D (2010)	1
FOXB1	1	7515	0	affinity chromatography technology	Li X (2015)	1
TGOLN2	1	CHD1L	5	affinity chromatography technology	Huttlin EL (2015)	1
RETREG2	2	CHD1L	5	affinity chromatography technology	Hein MY (2015)	1
RPA1	0	CDC5L	2	affinity chromatography technology, pull down, affinity chromatography technology	Marechal A (2014), Marechal A (2014), Lleres D (2010)	3
HLTF	7	HSPA8	4	two hybrid	Wang J (2011)	1
CHD1L	5	7515	0	affinity chromatography technology, affinity chromatography technology	Ahel D (2009), Huttlin EL (2017)	2
NTRK1	1	PLK1	0	affinity chromatography technology	Emdal KB (2015)	1
RPA3	2	HNRNPL	3	affinity chromatography technology	Marechal A (2014)	1
ART3	1	CHD1L	5	affinity chromatography technology	Huttlin EL (2015)	1
CHD1L	5	XRCC6	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Ahel D (2009), Ahel D (2009), Kulkarni A (2013), Huttlin EL (2017)	5
FOXP1	23	RPA3	2	affinity chromatography technology	Li X (2015)	1
XRCC5	5	SSRP1	1	affinity chromatography technology, imaging technique	Sand-Dejmek J (2011), Sand-Dejmek J (2011)	2
RNF146	4	HLTF	7	affinity chromatography technology, affinity chromatography technology	Kang HC (2011), Huttlin EL (2015)	2
CBX1	0	CBX5	3	affinity chromatography technology, affinity chromatography technology, pull down, pull down, imaging technique, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nielsen AL (2001), Nielsen AL (2001), Nielsen AL (2001), Nielsen AL (2001), Mateos-Langerak J (2007), Mateos-Langerak J (2007), Rosnoblet C (2011), Nozawa RS (2010), Hauri S (2016), Hauri S (2016)	10
KLK11	0	CHD1L	5	affinity chromatography technology	Huttlin EL (2015)	1
NTRK1	1	SSRP1	1	affinity chromatography technology	Emdal KB (2015)	1
EGLN3	0	PLK1	0	affinity chromatography technology	Rodriguez J (2016)	1
XPC	1	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
RPA3	2	PRKDC	12	affinity chromatography technology	Marechal A (2014)	1
APLF	3	SSRP1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
FOXP1	23	RPA2	0	affinity chromatography technology	Li X (2015)	1
LRRK2	5	CHD1L	5	affinity chromatography technology	Hein MY (2015)	1
CHD1L	5	TNKS	12	affinity chromatography technology	Huttlin EL (2017)	1
NT5E	1	RFC2	0	affinity chromatography technology	Huttlin EL (2015)	1
XRCC5	5	SUPT16H	4	affinity chromatography technology, affinity chromatography technology	Sand-Dejmek J (2011), Sand-Dejmek J (2011)	2
CHD1L	5	CBX1	0	affinity chromatography technology	Ahel D (2009)	1
XRCC5	5	APLF	3	pull down, affinity chromatography technology, affinity chromatography technology	Kanno S (2007), Huttlin EL (2015), Huttlin EL (2017)	3
RPA3	2	HLTF	7	affinity chromatography technology	Marechal A (2014)	1
CDC5L	2	EIF4A1	3	affinity chromatography technology	Lleres D (2010)	1
RNF146	4	XRCC6	3	affinity chromatography technology, affinity chromatography technology, enzymatic study	Kang HC (2011), Kang HC (2011), Kang HC (2011)	3
CDC5L	2	HLTF	7	affinity chromatography technology	Lleres D (2010)	1
H2AFX	1	SUPT16H	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Du YC (2006), Heo K (2008), Heo K (2008), Heo K (2008), Huttlin EL (2017)	5
H2AFX	1	PARP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Du YC (2006), Du YC (2006), Heo K (2008), Heo K (2008), Heo K (2008), Yang X (2010), Yang X (2010), Huttlin EL (2017)	8
LAMP2	0	CHD1L	5	affinity chromatography technology	Huttlin EL (2017)	1
CHD1L	5	APLF	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ahel D (2009), Kulkarni A (2013), Huttlin EL (2015), Huttlin EL (2017)	4
NTRK1	1	API5	0	affinity chromatography technology	Emdal KB (2015)	1
HIST1H2BB	3	SSRP1	1	biochemical	Havugimana PC (2012)	1
XPC	1	SUPT16H	4	affinity chromatography technology	Huttlin EL (2017)	1
RPA1	0	RFC2	0	affinity chromatography technology, affinity chromatography technology	Marechal A (2014), Elia AE (2015)	2
SRPK2	1	CBX5	3	enzymatic study	Varjosalo M (2013)	1
PARP2	0	CBX5	3	affinity chromatography technology, affinity chromatography technology	Quenet D (2008), Quenet D (2008)	2
LAMP2	0	HSPA8	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ferreira JV (2013), Du C (2017), Du C (2017)	3
CCL22	1	CHD1L	5	affinity chromatography technology	Huttlin EL (2017)	1
CHD1L	5	HIST2H2AA4	0	affinity chromatography technology	Gottschalk AJ (2009)	1
FAM196A	1	CHD1L	5	affinity chromatography technology	Huttlin EL (2017)	1
SSRP1	1	PARP1	3	affinity chromatography technology	Huttlin EL (2017)	1
NTRK1	1	XRCC5	5	affinity chromatography technology	Emdal KB (2015)	1
CHD1L	5	API5	0	affinity chromatography technology	Ahel D (2009)	1
CIAO1	3	CHD1L	5	affinity chromatography technology, affinity chromatography technology	Stehling O (2013), Stehling O (2013)	2
FOXB1	1	CHD1L	5	affinity chromatography technology	Li X (2015)	1
CHD1L	5	HIST1H2BK	0	affinity chromatography technology	Gottschalk AJ (2009)	1
CHD1L	5	PRKDC	12	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Ahel D (2009), Ahel D (2009)	3
HIST1H2BA	0	XPC	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PARP1	3	XRCC6	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, enzymatic study, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Ju BG (2006), Galande S (1999), Galande S (1999), Galande S (1999), Idogawa M (2007), Li B (2004), Li B (2004), Yin H (2006), Yin H (2006), Wu T (2013), Huttlin EL (2017)	11
CHD1L	5	XRCC5	5	affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Ahel D (2009)	2
RPA3	2	CDC5L	2	affinity chromatography technology, pull down	Marechal A (2014), Marechal A (2014)	2
HIST1H2BA	0	H2AFZ	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CHD1L	5	644914	0	affinity chromatography technology	Gottschalk AJ (2009)	1
RPA3	2	7515	0	affinity chromatography technology	Marechal A (2014)	1
APLF	3	7515	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Gibbs-Seymour I (2016), Huttlin EL (2017)	3
CDC5L	2	PARP1	3	affinity chromatography technology	Lleres D (2010)	1
SRPK2	1	CHD1L	5	enzymatic study	Lipp JJ (2015)	1
PARP1	3	PRKDC	12	affinity chromatography technology	Ju BG (2006)	1
H2AFX	1	XRCC6	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology	Mischo HE (2005), Mischo HE (2005), Heo K (2008), Heo K (2008), Heo K (2008), Lee HS (2010), Kobayashi J (2012), Huttlin EL (2017)	8
CBX3	1	CBX5	3	affinity chromatography technology, affinity chromatography technology, pull down, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nielsen AL (2001), Nielsen AL (2001), Nielsen AL (2001), Nielsen AL (2001), Mateos-Langerak J (2007), Quivy JP (2004), Quivy JP (2004), Quivy JP (2004), Kiyomitsu T (2010), Rosnoblet C (2011), Nozawa RS (2010), Vermeulen M (2010), Vermeulen M (2010), Hauri S (2016), Hauri S (2016)	15
H2AFX	1	XRCC5	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Heo K (2008), Heo K (2008), Sand-Dejmek J (2011)	3
RPA3	2	RPA1	0	biochemical, x-ray crystallography, affinity chromatography technology, biochemical, two hybrid, biochemical, affinity chromatography technology, affinity chromatography technology	Bochkareva E (1998), Bochkareva E (2002), Gong Z (2011), Havugimana PC (2012), Du Y (2009), Wan C (2015), Hein MY (2015), Elia AE (2015)	8
RNF146	4	7515	0	affinity chromatography technology, affinity chromatography technology, enzymatic study	Kang HC (2011), Kang HC (2011), Kang HC (2011)	3
NTRK1	1	PARP1	3	affinity chromatography technology	Emdal KB (2015)	1
RPA2	0	XPC	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
7515	0	PARP2	0	affinity chromatography technology, affinity chromatography technology	Schreiber V (2002), Schreiber V (2002)	2
RNF166	0	HLTF	7	affinity chromatography technology	Huttlin EL (2015)	1
SSRP1	1	XPC	1	affinity chromatography technology	Huttlin EL (2017)	1
EGLN3	0	RPA3	2	affinity chromatography technology	Rodriguez J (2016)	1
SGO1	2	CBX5	3	imaging technique, affinity chromatography technology	Kiyomitsu T (2010), Nozawa RS (2010)	2
CHD1L	5	HIST3H2A	0	affinity chromatography technology	Gottschalk AJ (2009)	1
CDC5L	2	HSPA8	4	affinity chromatography technology, biochemical, affinity chromatography technology	Ajuh P (2000), Ajuh P (2000), Lleres D (2010)	3
SNW1	0	RPA1	0	affinity chromatography technology	Lleres D (2010)	1
PRKDC	12	H2AFX	1	enzymatic study, enzymatic study, affinity chromatography technology, pull down, enzymatic study, enzymatic study	Park EJ (2003), Mischo HE (2005), Heo K (2008), Heo K (2008), Li A (2010), Kim K (2012)	6
PARP1	3	PARP2	0	affinity chromatography technology	Schreiber V (2002)	1
CBX5	3	XRCC6	3	two hybrid, pull down, affinity chromatography technology	Song K (2001), Song K (2001), Song K (2001)	3
RPA1	0	HLTF	7	affinity chromatography technology, affinity chromatography technology	Marechal A (2014), Elia AE (2015)	2
RNF146	4	SUPT16H	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RNF166	0	TNKS	12	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
8339	0	CHD1L	5	bioid	Lambert JP (2015)	1
SRPK2	1	SUPT16H	4	enzymatic study	Varjosalo M (2013)	1
CHD1L	5	PARP2	0	affinity chromatography technology, affinity chromatography technology	Gottschalk AJ (2009), Huttlin EL (2017)	2
TRIM33	4	SSRP1	1	affinity chromatography technology	Bai X (2010)	1
NTRK1	1	XRCC6	3	affinity chromatography technology	Emdal KB (2015)	1
CDC5L	2	RFC2	0	affinity chromatography technology	Lleres D (2010)	1
TRIM33	4	SUPT16H	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bai X (2010), Bai X (2010), Bai X (2010)	3
PRKDC	12	RPA1	0	pull down, affinity chromatography technology, affinity chromatography technology	Shao RG (1999), Gong Z (2011), Marechal A (2014)	3
8339	0	PARP2	0	bioid	Lambert JP (2015)	1
FOXB1	1	RPA2	0	affinity chromatography technology	Li X (2015)	1
CBX3	1	XRCC6	3	affinity chromatography technology	Rosnoblet C (2011)	1
RNF166	0	7515	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CHD1L	5	HIST2H2BE	1	affinity chromatography technology	Kulkarni A (2013)	1
8339	0	HIST2H2AA4	0	bioid	Lambert JP (2015)	1
SNW1	0	CHD1L	5	affinity chromatography technology	Lleres D (2010)	1
H2AFX	1	EIF4A1	3	affinity chromatography technology	Yang X (2010)	1
NTRK1	1	CHD1L	5	affinity chromatography technology	Emdal KB (2015)	1
RPA1	0	XPC	1	pull down	Thoma BS (2005)	1
SRPK2	1	HIST1H2BK	0	enzymatic study	Lipp JJ (2015)	1
RPA2	0	HNRNPL	3	affinity chromatography technology	Marechal A (2014)	1
HSPA8	4	PRKDC	12	biochemical	Havugimana PC (2012)	1
HNRNPL	3	SRPK2	1	affinity chromatography technology	Fei T (2017)	1
TEAD2	2	SUPT16H	4	affinity chromatography technology	Huttlin EL (2017)	1
NTRK1	1	SCYL1	5	affinity chromatography technology	Emdal KB (2015)	1
FOXB1	1	PARP2	0	affinity chromatography technology	Li X (2015)	1
RNF166	0	PARP1	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RNF146	4	PARP2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kang HC (2011), Huttlin EL (2015), Huttlin EL (2017)	3
RPA3	2	XRCC5	5	affinity chromatography technology	Marechal A (2014)	1
APLF	3	XPC	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
H2AFX	1	PARP2	0	affinity chromatography technology	Huttlin EL (2017)	1
HIST1H2BA	0	SUPT16H	4	affinity chromatography technology, biochemical, affinity chromatography technology	Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	3
RPA2	0	XRCC5	5	affinity chromatography technology	Marechal A (2014)	1
8339	0	XPC	1	bioid	Lambert JP (2015)	1
HIF1AN	0	TNKS2	6	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Rodriguez J (2016)	2
RPA1	0	HSPA8	4	affinity chromatography technology	Marechal A (2014)	1
EGLN3	0	SNW1	0	affinity chromatography technology	Rodriguez J (2016)	1
EGLN3	0	EIF4A1	3	affinity chromatography technology	Rodriguez J (2016)	1
SUPT16H	4	RPA3	2	affinity chromatography technology	Boldt K (2016)	1
FOXP1	23	7515	0	affinity chromatography technology	Li X (2015)	1
RFC2	0	PRKDC	12	biochemical	Kristensen AR (2012)	1
CBX5	3	HIST3H2A	0	pull down	Nielsen AL (2001)	1