PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr9	36572851	36572932	CAGE_peak_1_at_MELK_5end
chr9	36572939	36572950	CAGE_peak_2_at_MELK_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I036572	36572200	36576400	2.2	[{'connected_gene': 'MELK', 'score': 550.77}, {'connected_gene': 'RGP1', 'score': 13.02}, {'connected_gene': 'ARHGEF39', 'score': 12.22}, {'connected_gene': 'ZCCHC7', 'score': 11.98}, {'connected_gene': 'GC09P036567', 'score': 0.44}, {'connected_gene': 'GC09M036678', 'score': 0.15}]
chr9	GH09I036415	36415447	36417187	0.38	[{'connected_gene': 'MELK', 'score': 11.17}, {'connected_gene': 'MRPS21P4', 'score': 0.44}, {'connected_gene': 'RNF38', 'score': 0.19}]
chr9	GH09I036924	36924977	36925093	0.64	[{'connected_gene': 'MELK', 'score': 2.33}, {'connected_gene': 'MIR4476', 'score': 0.29}, {'connected_gene': 'LOC105376032', 'score': 0.18}, {'connected_gene': 'PAX5', 'score': 0.14}]
chr9	GH09I036584	36584443	36585983	0.49	[{'connected_gene': 'MELK', 'score': 0.39}, {'connected_gene': 'GC09M036678', 'score': 0.16}]
chr9	GH09I036571	36571944	36572093	0.31	[{'connected_gene': 'MELK', 'score': 550.77}, {'connected_gene': 'GC09P036567', 'score': 0.77}]
chr9	GH09I036623	36623404	36623553	0.43	[{'connected_gene': 'MELK', 'score': 0.23}, {'connected_gene': 'GC09M036678', 'score': 0.22}]
chr9	GH09I036419	36419192	36420756	0.91	[{'connected_gene': 'RNF38', 'score': 19.0}, {'connected_gene': 'MELK', 'score': 12.27}, {'connected_gene': 'GNE', 'score': 9.94}, {'connected_gene': 'MRPS21P4', 'score': 0.44}]
chr9	GH09I036640	36640271	36641578	0.2	[{'connected_gene': 'RNF38', 'score': 4.44}, {'connected_gene': 'GC09M036678', 'score': 0.28}, {'connected_gene': 'MELK', 'score': 0.2}]
chr9	GH09I036665	36665767	36667529	1.01	[{'connected_gene': 'GC09M036678', 'score': 0.39}, {'connected_gene': 'MELK', 'score': 0.16}]
chr9	GH09I036624	36624376	36626173	0.58	[{'connected_gene': 'GC09M036678', 'score': 0.23}, {'connected_gene': 'MELK', 'score': 0.23}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000298048	[[36572858, 36573004], [36581640, 36581736], [36583623, 36583709], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677503]]	[[36581678, 36581736], [36583623, 36583709], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
ENST00000538311	[[36572859, 36573004], [36581640, 36581736], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36603986, 36604109], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677426]]	[[36607586, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
ENST00000536987	[[36572891, 36573004], [36589532, 36589649], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677678]]	[[36589637, 36589649], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
ENST00000489766	[[36572893, 36573004], [36581640, 36581736], [36583623, 36583709], [36589532, 36589649], [36599390, 36599483], [36607571, 36607619]]	None
ENST00000495529	[[36572893, 36573004], [36581640, 36581736], [36583623, 36583709], [36589532, 36589649], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633152]]	None
ENST00000536860	[[36572893, 36573004], [36581640, 36581736], [36583623, 36583709], [36589532, 36589649], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677644]]	[[36581678, 36581736], [36583623, 36583709], [36589532, 36589649], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
ENST00000545008	[[36572893, 36573004], [36581640, 36581736], [36583623, 36583709], [36589532, 36589649], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677678]]	[[36581678, 36581736], [36583623, 36583709], [36589532, 36589649], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
ENST00000536329	[[36572905, 36573004], [36581640, 36581736], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677676]]	[[36581688, 36581736], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
ENST00000541717	[[36572906, 36573004], [36581640, 36581736], [36583623, 36583709], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677656]]	[[36581678, 36581736], [36583623, 36583709], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
ENST00000543751	[[36572907, 36573004], [36581640, 36581736], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677676]]	[[36581688, 36581736], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
ENST00000487398	[[36572920, 36573195], [36581640, 36581736], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364]]	None
ENST00000480021	[[36630003, 36630364], [36633098, 36633197]]	None
NM_001256692	[[36572858, 36573004], [36589532, 36589649], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677680]]	[[36589637, 36589649], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
NM_001256693	[[36572858, 36573004], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607575, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677680]]	[[36607586, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
NM_001256690	[[36572858, 36573004], [36581640, 36581736], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677680]]	[[36581688, 36581736], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
NM_001256691	[[36572858, 36573004], [36581640, 36581736], [36589532, 36589649], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677680]]	[[36581688, 36581736], [36589532, 36589649], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
NM_001256689	[[36572858, 36573004], [36581640, 36581736], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677680]]	[[36581688, 36581736], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
NR_046337	[[36572858, 36573004], [36581640, 36581736], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36603986, 36604109], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677680]]	None
NM_001256688	[[36572858, 36573004], [36581640, 36581736], [36583623, 36583709], [36589532, 36589649], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677680]]	[[36581678, 36581736], [36583623, 36583709], [36589532, 36589649], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
NM_001256687	[[36572858, 36573004], [36581640, 36581736], [36583623, 36583709], [36589532, 36589649], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677680]]	[[36581678, 36581736], [36583623, 36583709], [36589532, 36589649], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
NM_001256685	[[36572858, 36573004], [36581640, 36581736], [36583623, 36583709], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677680]]	[[36581678, 36581736], [36583623, 36583709], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]
NM_014791	[[36572858, 36573004], [36581640, 36581736], [36583623, 36583709], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677680]]	[[36581678, 36581736], [36583623, 36583709], [36589532, 36589649], [36594624, 36594768], [36597218, 36597287], [36599390, 36599483], [36607571, 36607670], [36630295, 36630364], [36633098, 36633197], [36642993, 36643080], [36651742, 36651874], [36657237, 36657360], [36665346, 36665578], [36669306, 36669403], [36670994, 36671163], [36674830, 36674934], [36677156, 36677334]]