PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
NM_014817	[[28992973, 28997498], [28997499, 28997596], [28997598, 28998029]]	[[28995226, 28997498], [28997499, 28997596], [28997598, 28997662]]

Promoter

Chrom	Start	End	Description
chr7	28997992	28998011	CAGE_peak_4_at_TRIL_5end
chr7	28998023	28998038	CAGE_peak_5_at_TRIL_5end
chr7	28998207	28998227	CAGE_peak_6_at_TRIL_5end
chr7	28998254	28998261	CAGE_peak_10_at_TRIL_5end
chr7	28998275	28998284	CAGE_peak_8_at_TRIL_5end
chr7	28998372	28998378	CAGE_peak_9_at_TRIL_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr7	GH07I029319	29319601	29320401	1.21	[{'connected_gene': 'CHN2', 'score': 25.21}, {'connected_gene': 'CPVL', 'score': 11.69}, {'connected_gene': 'LOC102724484', 'score': 10.38}, {'connected_gene': 'TRIL', 'score': 7.19}, {'connected_gene': 'GC07P029212', 'score': 0.14}, {'connected_gene': 'GC07M029201', 'score': 0.08}]
chr7	GH07I028953	28953368	28954203	0.72	[{'connected_gene': 'LOC107986703', 'score': 11.82}, {'connected_gene': 'ENSG00000233517', 'score': 11.66}, {'connected_gene': 'TRIL', 'score': 0.77}, {'connected_gene': 'ENSG00000228421', 'score': 0.77}, {'connected_gene': 'GC07P028823', 'score': 0.12}]
chr7	GH07I028955	28955516	28959714	1.95	[{'connected_gene': 'ENSG00000228421', 'score': 576.89}, {'connected_gene': 'TRIL', 'score': 550.77}, {'connected_gene': 'GC07P028959', 'score': 550.77}, {'connected_gene': 'PIR62921', 'score': 550.77}, {'connected_gene': 'LOC107986703', 'score': 11.82}, {'connected_gene': 'ENSG00000233517', 'score': 11.68}, {'connected_gene': 'GC07P028823', 'score': 0.12}]