Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000307750 [[37438110, 37442552], [37465211, 37465396]] [[37440514, 37442548]]
NM_014872 [[37438098, 37442552], [37465211, 37465407]] [[37440514, 37442548]]
Promoter
Chrom Start End Description
chr9 37465273 37465338 CAGE_peak_2_at_ZBTB5_5end
chr9 37465399 37465454 CAGE_peak_1_at_ZBTB5_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr9 GH09I037408 37408285 37410827 1.34 [{'connected_gene': 'ZBTB5', 'score': 10.43}, {'connected_gene': 'GRHPR', 'score': 7.81}, {'connected_gene': 'PAX5', 'score': 5.14}, {'connected_gene': 'ZCCHC7', 'score': 2.21}, {'connected_gene': 'TOMM5', 'score': 1.61}, {'connected_gene': 'POLR1E', 'score': 1.46}, {'connected_gene': 'LINC01627', 'score': 0.39}, {'connected_gene': 'LOC105376035', 'score': 0.26}]
chr9 GH09I037407 37407584 37407733 0.84 [{'connected_gene': 'ZBTB5', 'score': 10.43}, {'connected_gene': 'GRHPR', 'score': 7.71}, {'connected_gene': 'LINC01627', 'score': 0.39}, {'connected_gene': 'LOC105376035', 'score': 0.26}]
chr9 GH09I037410 37410904 37411293 0.88 [{'connected_gene': 'ZBTB5', 'score': 10.44}, {'connected_gene': 'ENSG00000234160', 'score': 5.32}, {'connected_gene': 'GRHPR', 'score': 0.39}, {'connected_gene': 'LINC01627', 'score': 0.37}, {'connected_gene': 'LOC105376035', 'score': 0.25}]
chr9 GH09I037195 37195357 37199347 1.66 [{'connected_gene': 'ZBTB5', 'score': 1.83}, {'connected_gene': 'ZCCHC7', 'score': 1.46}, {'connected_gene': 'ENSG00000228292', 'score': 0.44}, {'connected_gene': 'GC09P037179', 'score': 0.37}]
chr9 GH09I037463 37463345 37469184 2.28 [{'connected_gene': 'ZBTB5', 'score': 574.67}, {'connected_gene': 'DCAF10', 'score': 40.25}, {'connected_gene': 'EXOSC3', 'score': 40.2}, {'connected_gene': 'ZCCHC7', 'score': 31.65}, {'connected_gene': 'RPL21P83', 'score': 15.18}, {'connected_gene': 'RNF38', 'score': 12.37}, {'connected_gene': 'TRMT10B', 'score': 12.04}, {'connected_gene': 'GRHPR', 'score': 11.35}, {'connected_gene': 'TMX2P1', 'score': 11.23}, {'connected_gene': 'POLR1E', 'score': 10.12}, {'connected_gene': 'KCTD9P3', 'score': 0.39}]
chr9 GH09I037412 37411344 37411493 0.99 [{'connected_gene': 'ZBTB5', 'score': 23.17}, {'connected_gene': 'EXOSC3', 'score': 18.49}, {'connected_gene': 'DCAF10', 'score': 16.81}, {'connected_gene': 'ZCCHC7', 'score': 16.66}, {'connected_gene': 'GRHPR', 'score': 0.39}, {'connected_gene': 'LINC01627', 'score': 0.37}, {'connected_gene': 'LOC105376035', 'score': 0.25}]
chr9 GH09I037511 37511124 37511273 0.49 [{'connected_gene': 'ZBTB5', 'score': 11.0}, {'connected_gene': 'FBXO10', 'score': 10.52}, {'connected_gene': 'TOMM5', 'score': 10.49}, {'connected_gene': 'ENSG00000256966', 'score': 10.49}, {'connected_gene': 'FRMPD1', 'score': 9.79}, {'connected_gene': 'ENSG00000234160', 'score': 0.77}, {'connected_gene': 'PIR43909', 'score': 0.77}]
chr9 GH09I037512 37512524 37512673 0.38 [{'connected_gene': 'ZBTB5', 'score': 10.73}, {'connected_gene': 'ENSG00000234160', 'score': 0.77}, {'connected_gene': 'PIR43909', 'score': 0.77}, {'connected_gene': 'FBXO10', 'score': 0.21}, {'connected_gene': 'ENSG00000256966', 'score': 0.18}]
chr9 GH09I037436 37436401 37437473 0.38 [{'connected_gene': 'ZBTB5', 'score': 11.52}, {'connected_gene': 'PIR34813', 'score': 0.77}, {'connected_gene': 'CHCHD4P3', 'score': 0.77}, {'connected_gene': 'GRHPR', 'score': 0.39}]
chr9 GH09I037430 37430596 37431414 0.94 [{'connected_gene': 'ZBTB5', 'score': 24.31}, {'connected_gene': 'CHCHD4P3', 'score': 0.77}, {'connected_gene': 'GRHPR', 'score': 0.44}]
chr9 GH09I037411 37411893 37413912 0.83 [{'connected_gene': 'GRHPR', 'score': 15.07}, {'connected_gene': 'ZBTB5', 'score': 10.49}, {'connected_gene': 'LINC01627', 'score': 0.37}, {'connected_gene': 'LOC105376035', 'score': 0.25}]
chr9 GH09I037449 37449904 37450053 0.4 [{'connected_gene': 'GRHPR', 'score': 11.84}, {'connected_gene': 'PIR45700', 'score': 0.44}, {'connected_gene': 'GC09M037461', 'score': 0.44}, {'connected_gene': 'ZBTB5', 'score': 0.37}]
chr9 GH09I037446 37446087 37447449 0.49 [{'connected_gene': 'GRHPR', 'score': 12.54}, {'connected_gene': 'PAX5', 'score': 10.02}, {'connected_gene': 'LOC105376032', 'score': 10.02}, {'connected_gene': 'PIR45700', 'score': 0.77}, {'connected_gene': 'GC09M037461', 'score': 0.39}, {'connected_gene': 'ZBTB5', 'score': 0.37}]
chr9 GH09I036765 36765001 36766653 1.39 [{'connected_gene': 'ZCCHC7', 'score': 16.65}, {'connected_gene': 'ZBTB5', 'score': 12.75}, {'connected_gene': 'HMGB3P24', 'score': 10.62}, {'connected_gene': 'RNF38', 'score': 1.5}, {'connected_gene': 'LOC105376030', 'score': 0.39}, {'connected_gene': 'GC09M036721', 'score': 0.26}]
chr9 GH09I037692 37692244 37693981 0.63 [{'connected_gene': 'ZCCHC7', 'score': 21.53}, {'connected_gene': 'FRMPD1', 'score': 20.43}, {'connected_gene': 'EXOSC3', 'score': 12.33}, {'connected_gene': 'DCAF10', 'score': 12.31}, {'connected_gene': 'ZBTB5', 'score': 10.73}, {'connected_gene': 'POLR1E', 'score': 10.09}, {'connected_gene': 'RPL21P83', 'score': 6.58}, {'connected_gene': 'GC09M037661', 'score': 0.29}, {'connected_gene': 'RN7SKP171', 'score': 0.29}, {'connected_gene': 'TRMT10B', 'score': 0.21}, {'connected_gene': 'ENSG00000255872', 'score': 0.05}]
chr9 GH09I037166 37166448 37168768 0.49 [{'connected_gene': 'ZCCHC7', 'score': 13.63}, {'connected_gene': 'TRMT10B', 'score': 12.37}, {'connected_gene': 'ZBTB5', 'score': 11.1}, {'connected_gene': 'HMGB3P24', 'score': 9.75}, {'connected_gene': 'LOC105376033', 'score': 0.44}, {'connected_gene': 'GC09P037179', 'score': 0.39}]
chr9 GH09I037119 37119529 37122233 2.3 [{'connected_gene': 'ZCCHC7', 'score': 583.21}, {'connected_gene': 'LOC105376034', 'score': 550.77}, {'connected_gene': 'EXOSC3', 'score': 30.61}, {'connected_gene': 'DCAF10', 'score': 16.79}, {'connected_gene': 'TRMT10B', 'score': 13.12}, {'connected_gene': 'ZBTB5', 'score': 12.77}, {'connected_gene': 'HMGB3P24', 'score': 10.6}, {'connected_gene': 'GC09P037160', 'score': 0.28}]
chr9 GH09I038141 38141406 38142824 0.85 [{'connected_gene': 'DCAF10', 'score': 14.1}, {'connected_gene': 'ZBTB5', 'score': 12.57}, {'connected_gene': 'POLR1E', 'score': 11.47}, {'connected_gene': 'SHB', 'score': 8.01}, {'connected_gene': 'GC09P038148', 'score': 0.44}, {'connected_gene': 'PIR39865', 'score': 0.34}]
chr9 GH09I036991 36991303 36998649 1.31 [{'connected_gene': 'DCAF10', 'score': 14.08}, {'connected_gene': 'ZBTB5', 'score': 12.59}, {'connected_gene': 'POLR1E', 'score': 11.48}, {'connected_gene': 'PAX5', 'score': 11.41}, {'connected_gene': 'ZCCHC7', 'score': 10.92}, {'connected_gene': 'RPL21P83', 'score': 4.94}, {'connected_gene': 'LOC105376032', 'score': 0.44}, {'connected_gene': 'MIR4476', 'score': 0.15}]
chr9 GH09I037476 37476984 37477133 0.38 [{'connected_gene': 'KCTD9P3', 'score': 550.77}, {'connected_gene': 'ENSG00000234160', 'score': 11.22}, {'connected_gene': 'GRHPR', 'score': 10.99}, {'connected_gene': 'ZCCHC7', 'score': 10.98}, {'connected_gene': 'ZBTB5', 'score': 0.39}]
chr9 GH09I037485 37485062 37488539 2.21 [{'connected_gene': 'POLR1E', 'score': 580.95}, {'connected_gene': 'RPL21P83', 'score': 44.65}, {'connected_gene': 'ZCCHC7', 'score': 27.91}, {'connected_gene': 'EXOSC3', 'score': 23.7}, {'connected_gene': 'ZBTB5', 'score': 16.41}, {'connected_gene': 'FBXO10', 'score': 16.31}, {'connected_gene': 'ENSG00000234160', 'score': 12.54}, {'connected_gene': 'DCAF10', 'score': 11.04}, {'connected_gene': 'TOMM5', 'score': 10.79}, {'connected_gene': 'ENSG00000256966', 'score': 10.79}, {'connected_gene': 'TMX2P1', 'score': 9.83}, {'connected_gene': 'FRMPD1', 'score': 9.74}, {'connected_gene': 'GRHPR', 'score': 8.88}, {'connected_gene': 'GC09M037494', 'score': 0.77}]
chr9 GH09I038175 38175604 38177083 0.69 [{'connected_gene': 'EXOSC3', 'score': 32.79}, {'connected_gene': 'ZBTB5', 'score': 32.09}, {'connected_gene': 'DCAF10', 'score': 30.13}, {'connected_gene': 'TRMT10B', 'score': 25.31}, {'connected_gene': 'ENSG00000200026', 'score': 11.8}, {'connected_gene': 'TMX2P1', 'score': 11.25}, {'connected_gene': 'RPL21P83', 'score': 10.11}, {'connected_gene': 'POLR1E', 'score': 9.69}, {'connected_gene': 'PIR59956', 'score': 0.77}, {'connected_gene': 'PIR60591', 'score': 0.37}]
chr9 GH09I037799 37799682 37802575 2.14 [{'connected_gene': 'EXOSC3', 'score': 579.34}, {'connected_gene': 'DCAF10', 'score': 561.97}, {'connected_gene': 'TRMT10B', 'score': 34.5}, {'connected_gene': 'ZBTB5', 'score': 30.73}, {'connected_gene': 'ZCCHC7', 'score': 23.66}, {'connected_gene': 'POLR1E', 'score': 20.02}, {'connected_gene': 'SLC25A51', 'score': 13.16}, {'connected_gene': 'TMX2P1', 'score': 11.37}, {'connected_gene': 'RPL21P83', 'score': 10.14}, {'connected_gene': 'ENSG00000255872', 'score': 0.06}]
chr9 GH09I038021 38021752 38029289 1.38 [{'connected_gene': 'EXOSC3', 'score': 27.3}, {'connected_gene': 'SHB', 'score': 19.21}, {'connected_gene': 'TMX2P1', 'score': 18.47}, {'connected_gene': 'DCAF10', 'score': 16.83}, {'connected_gene': 'SLC25A51', 'score': 16.74}, {'connected_gene': 'ZCCHC7', 'score': 16.62}, {'connected_gene': 'ZBTB5', 'score': 12.75}, {'connected_gene': 'ENSG00000255872', 'score': 12.39}, {'connected_gene': 'RNU7-124P', 'score': 11.6}, {'connected_gene': 'GC09M038093', 'score': 0.26}, {'connected_gene': 'GC09P038069', 'score': 0.26}]
chr9 GH09I037374 37374405 37379106 1.21 [{'connected_gene': 'PAX5', 'score': 18.52}, {'connected_gene': 'ZCCHC7', 'score': 3.2}, {'connected_gene': 'ZBTB5', 'score': 2.58}, {'connected_gene': 'FBXO10', 'score': 1.81}, {'connected_gene': 'LOC105376035', 'score': 0.39}, {'connected_gene': 'LINC01627', 'score': 0.37}]
chr9 GH09I037369 37369129 37372699 1.28 [{'connected_gene': 'PAX5', 'score': 34.62}, {'connected_gene': 'ZCCHC7', 'score': 4.33}, {'connected_gene': 'ZBTB5', 'score': 2.87}, {'connected_gene': 'FBXO10', 'score': 1.64}, {'connected_gene': 'LOC105376035', 'score': 0.44}, {'connected_gene': 'LINC01627', 'score': 0.34}]
chr9 GH09I037402 37402604 37404876 1.26 [{'connected_gene': 'PAX5', 'score': 25.95}, {'connected_gene': 'ZCCHC7', 'score': 13.09}, {'connected_gene': 'ZBTB5', 'score': 12.27}, {'connected_gene': 'LOC105376032', 'score': 10.79}, {'connected_gene': 'LOC105376034', 'score': 10.58}, {'connected_gene': 'GRHPR', 'score': 8.11}, {'connected_gene': 'LINC01627', 'score': 0.44}, {'connected_gene': 'LOC105376035', 'score': 0.28}]
chr9 GH09I037026 37026011 37038375 2.26 [{'connected_gene': 'PAX5', 'score': 573.67}, {'connected_gene': 'DCAF10', 'score': 16.92}, {'connected_gene': 'ZCCHC7', 'score': 16.56}, {'connected_gene': 'EXOSC3', 'score': 10.25}, {'connected_gene': 'POLR1E', 'score': 9.8}, {'connected_gene': 'LOC105376032', 'score': 5.76}, {'connected_gene': 'ZBTB5', 'score': 2.01}, {'connected_gene': 'LOC105376031', 'score': 0.77}]
chr9 GH09I037573 37573954 37577535 1.89 [{'connected_gene': 'FBXO10', 'score': 565.23}, {'connected_gene': 'POLR1E', 'score': 14.7}, {'connected_gene': 'ZBTB5', 'score': 6.11}, {'connected_gene': 'GC09M037564', 'score': 0.44}, {'connected_gene': 'ENSG00000256966', 'score': 0.37}]
chr9 GH09I037582 37582664 37582813 0.6 [{'connected_gene': 'FRMPD1', 'score': 10.86}, {'connected_gene': 'ZBTB5', 'score': 10.31}, {'connected_gene': 'GC09P037586', 'score': 0.77}, {'connected_gene': 'TOMM5', 'score': 0.44}, {'connected_gene': 'FBXO10', 'score': 0.44}, {'connected_gene': 'ENSG00000256966', 'score': 0.44}]
chr9 GH09I037706 37706002 37706962 0.6 [{'connected_gene': 'FRMPD1', 'score': 24.86}, {'connected_gene': 'ZCCHC7', 'score': 13.24}, {'connected_gene': 'ZBTB5', 'score': 12.9}, {'connected_gene': 'DCAF10', 'score': 11.36}, {'connected_gene': 'TMX2P1', 'score': 11.28}, {'connected_gene': 'EXOSC3', 'score': 10.71}, {'connected_gene': 'RPL21P83', 'score': 10.16}, {'connected_gene': 'GC09M037661', 'score': 0.26}, {'connected_gene': 'RN7SKP171', 'score': 0.26}, {'connected_gene': 'TRMT10B', 'score': 0.25}, {'connected_gene': 'ENSG00000255872', 'score': 0.05}]
chr9 GH09I038318 38318532 38320316 0.99 [{'connected_gene': 'TRMT10B', 'score': 12.36}, {'connected_gene': 'ZBTB5', 'score': 11.06}, {'connected_gene': 'ALDH1B1', 'score': 10.76}, {'connected_gene': 'SLC25A51', 'score': 10.55}, {'connected_gene': 'RNU7-124P', 'score': 9.95}, {'connected_gene': 'ENSG00000255872', 'score': 9.88}, {'connected_gene': 'SHB', 'score': 9.88}, {'connected_gene': 'PIR45801', 'score': 0.44}, {'connected_gene': 'GC09P038330', 'score': 0.44}, {'connected_gene': 'GC09P038332', 'score': 0.44}, {'connected_gene': 'GC09P038329', 'score': 0.44}, {'connected_gene': 'GC09P038333', 'score': 0.44}, {'connected_gene': 'GC09P038326', 'score': 0.44}, {'connected_gene': 'GC09P038327', 'score': 0.44}, {'connected_gene': 'GC09P038331', 'score': 0.44}, {'connected_gene': 'GC09P038309', 'score': 0.39}]
chr9 GH09I037382 37382103 37382781 1.03 [{'connected_gene': 'TRMT10B', 'score': 12.03}, {'connected_gene': 'ZBTB5', 'score': 10.61}, {'connected_gene': 'LINC01627', 'score': 0.39}, {'connected_gene': 'LOC105376035', 'score': 0.37}]
chr9 GH09I037753 37753184 37754703 1.93 [{'connected_gene': 'TRMT10B', 'score': 565.4}, {'connected_gene': 'TMX2P1', 'score': 24.65}, {'connected_gene': 'SLC25A51', 'score': 13.1}, {'connected_gene': 'ZCCHC7', 'score': 13.02}, {'connected_gene': 'POLR1E', 'score': 11.34}, {'connected_gene': 'DCAF10', 'score': 10.86}, {'connected_gene': 'ZBTB5', 'score': 10.51}, {'connected_gene': 'EXOSC3', 'score': 10.31}, {'connected_gene': 'GC09M037773', 'score': 0.37}, {'connected_gene': 'ENSG00000255872', 'score': 0.06}]
chr9 GH09I037433 37433450 37434793 0.58 [{'connected_gene': 'CHCHD4P3', 'score': 550.77}, {'connected_gene': 'ZBTB5', 'score': 23.55}, {'connected_gene': 'GRHPR', 'score': 6.68}]
chr9 GH09I037435 37435804 37436305 0.2 [{'connected_gene': 'CHCHD4P3', 'score': 550.77}, {'connected_gene': 'ZBTB5', 'score': 16.04}, {'connected_gene': 'GRHPR', 'score': 11.41}, {'connected_gene': 'PIR34813', 'score': 0.44}]
chr9 GH09I037432 37432594 37433327 0.38 [{'connected_gene': 'CHCHD4P3', 'score': 550.77}, {'connected_gene': 'ZBTB5', 'score': 11.24}, {'connected_gene': 'GRHPR', 'score': 0.39}]
chr9 GH09I038073 38073933 38075274 0.97 [{'connected_gene': 'LOC105376039', 'score': 550.77}, {'connected_gene': 'DCAF10', 'score': 14.11}, {'connected_gene': 'ZBTB5', 'score': 12.57}, {'connected_gene': 'POLR1E', 'score': 11.47}, {'connected_gene': 'ZCCHC7', 'score': 10.82}, {'connected_gene': 'IGFBPL1', 'score': 9.54}, {'connected_gene': 'SHB', 'score': 0.44}]
chr9 GH09I037451 37451941 37453443 0.49 [{'connected_gene': 'RPL21P83', 'score': 18.24}, {'connected_gene': 'GRHPR', 'score': 11.7}, {'connected_gene': 'ZBTB5', 'score': 5.57}, {'connected_gene': 'GC09M037461', 'score': 0.44}, {'connected_gene': 'PIR45700', 'score': 0.39}]
chr9 GH09I037439 37439189 37443371 0.31 [{'connected_gene': 'PIR34813', 'score': 550.77}, {'connected_gene': 'PIR45700', 'score': 550.77}, {'connected_gene': 'ZBTB5', 'score': 25.25}, {'connected_gene': 'GRHPR', 'score': 11.46}, {'connected_gene': 'PAX5', 'score': 10.02}, {'connected_gene': 'LOC105376032', 'score': 10.02}, {'connected_gene': 'CHCHD4P3', 'score': 0.44}]
chr9 GH09I037470 37470392 37473977 1.26 [{'connected_gene': 'ENSG00000234160', 'score': 11.38}, {'connected_gene': 'ZBTB5', 'score': 6.67}, {'connected_gene': 'KCTD9P3', 'score': 0.77}]
chr9 GH09I037323 37323017 37326162 1.58 [{'connected_gene': 'GC09P037324', 'score': 550.77}, {'connected_gene': 'PAX5', 'score': 36.67}, {'connected_gene': 'TRMT10B', 'score': 14.08}, {'connected_gene': 'ZBTB5', 'score': 3.66}, {'connected_gene': 'ZCCHC7', 'score': 3.07}, {'connected_gene': 'FBXO10', 'score': 1.84}, {'connected_gene': 'RNU6-677P', 'score': 0.44}]
chr9 GH09I037501 37501564 37505398 0.66 [{'connected_gene': 'PIR55770', 'score': 550.77}, {'connected_gene': 'PIR31469', 'score': 550.77}, {'connected_gene': 'PIR42939', 'score': 550.77}, {'connected_gene': 'RPL21P83', 'score': 44.28}, {'connected_gene': 'POLR1E', 'score': 30.54}, {'connected_gene': 'FBXO10', 'score': 5.9}, {'connected_gene': 'ZBTB5', 'score': 5.85}]

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