PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000301645	[[59402736, 59404333], [59404911, 59405087], [59407064, 59407195], [59409162, 59409749], [59410787, 59411028], [59412577, 59412795]]	[[59404033, 59404333], [59404911, 59405087], [59407064, 59407195], [59409162, 59409749], [59410787, 59411028], [59412577, 59412657]]
NM_000780	[[59402736, 59404333], [59404911, 59405087], [59407064, 59407195], [59409162, 59409749], [59410787, 59411028], [59412577, 59412720]]	[[59404033, 59404333], [59404911, 59405087], [59407064, 59407195], [59409162, 59409749], [59410787, 59411028], [59412577, 59412657]]

Promoter

Chrom	Start	End	Description
chr8	59412717	59412723	CAGE_peak_1_at_CYP7A1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I058073	58073639	58074938	0.76	[{'connected_gene': 'FAM110B', 'score': 12.41}, {'connected_gene': 'CYP7A1', 'score': 4.66}, {'connected_gene': 'ENSG00000253116', 'score': 0.29}, {'connected_gene': 'ENSG00000253523', 'score': 0.26}, {'connected_gene': 'GC08M057799', 'score': 0.18}]
chr8	GH08I058457	58457711	58459750	0.62	[{'connected_gene': 'SDCBP', 'score': 5.95}, {'connected_gene': 'UBXN2B', 'score': 5.95}, {'connected_gene': 'GC08M058432', 'score': 0.39}, {'connected_gene': 'CYP7A1', 'score': 0.26}]
chr8	GH08I058470	58470649	58471902	0.85	[{'connected_gene': 'CYP7A1', 'score': 12.88}, {'connected_gene': 'SDCBP', 'score': 6.46}, {'connected_gene': 'GC08M058432', 'score': 0.31}]
chr8	GH08I058500	58500153	58500212	1.05	[{'connected_gene': 'CYP7A1', 'score': 550.77}, {'connected_gene': 'GC08M058432', 'score': 0.23}]
chr8	GH08I058480	58480542	58480691	0.69	[{'connected_gene': 'CYP7A1', 'score': 0.34}, {'connected_gene': 'GC08M058432', 'score': 0.29}]