PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000234198	[[172964166, 172965672], [172966189, 172966374], [172966866, 172967628]]	[[172965270, 172965672], [172966189, 172966374], [172966866, 172967266]]
ENST00000466293	[[172965284, 172966374], [172966866, 172967628]]	[[172966120, 172966374], [172966866, 172967266]]
NM_004405	[[172964165, 172965672], [172966189, 172966374], [172966866, 172967478]]	[[172965270, 172965672], [172966189, 172966374], [172966866, 172967266]]

Promoter

Chrom	Start	End	Description
chr2	172967017	172967029	CAGE_peak_8_at_DLX2_5end
chr2	172967225	172967232	CAGE_peak_7_at_DLX2_5end
chr2	172967242	172967265	CAGE_peak_2_at_DLX2_5end
chr2	172967266	172967271	CAGE_peak_6_at_DLX2_5end
chr2	172967276	172967296	CAGE_peak_3_at_DLX2_5end
chr2	172967323	172967336	CAGE_peak_4_at_DLX2_5end
chr2	172967353	172967365	CAGE_peak_5_at_DLX2_5end
chr2	172967621	172967637	CAGE_peak_1_at_DLX2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I172092	172092917	172103444	3.39	[{'connected_gene': 'DLX2', 'score': 562.0}, {'connected_gene': 'DCAF17', 'score': 42.54}, {'connected_gene': 'DAP3P2', 'score': 38.33}, {'connected_gene': 'RPS15P4', 'score': 10.32}, {'connected_gene': 'METAP1D', 'score': 10.24}, {'connected_gene': 'HAT1', 'score': 9.98}, {'connected_gene': 'ITGA6', 'score': 9.94}, {'connected_gene': 'ENSG00000232788', 'score': 9.93}, {'connected_gene': 'DLX1', 'score': 7.9}, {'connected_gene': 'DYNC1I2', 'score': 1.64}, {'connected_gene': 'DLX2-AS1', 'score': 0.77}, {'connected_gene': 'GC02P172093', 'score': 0.77}]
chr2	GH02I172131	172131390	172132681	0.43	[{'connected_gene': 'DLX2', 'score': 6.55}, {'connected_gene': 'LOC105373741', 'score': 0.44}, {'connected_gene': 'DLX2-AS1', 'score': 0.31}, {'connected_gene': 'GC02M172117', 'score': 0.22}]
chr2	GH02I172104	172104110	172104122	0.92	[{'connected_gene': 'DLX2', 'score': 550.77}, {'connected_gene': 'DLX2-AS1', 'score': 550.77}, {'connected_gene': 'LOC105373741', 'score': 0.29}]
chr2	GH02I172103	172103913	172104102	1.15	[{'connected_gene': 'DLX2', 'score': 550.77}, {'connected_gene': 'DLX2-AS1', 'score': 550.77}, {'connected_gene': 'LOC105373741', 'score': 0.29}]
chr2	GH02I172106	172103533	172103682	0.94	[{'connected_gene': 'DLX2', 'score': 550.77}, {'connected_gene': 'DLX2-AS1', 'score': 550.77}, {'connected_gene': 'LOC105373741', 'score': 0.29}]
chr2	GH02I172074	172074344	172074596	0.69	[{'connected_gene': 'GC02P172074', 'score': 550.77}, {'connected_gene': 'DLX2', 'score': 11.99}, {'connected_gene': 'DLX2-AS1', 'score': 11.99}, {'connected_gene': 'SLC25A12', 'score': 11.53}, {'connected_gene': 'METAP1D', 'score': 11.53}, {'connected_gene': 'HAT1', 'score': 10.97}, {'connected_gene': 'DLX1', 'score': 0.39}]
chr2	GH02I172071	172071791	172073521	1.12	[{'connected_gene': 'GC02P172074', 'score': 550.77}, {'connected_gene': 'DLX2', 'score': 11.97}, {'connected_gene': 'DLX2-AS1', 'score': 11.97}, {'connected_gene': 'SLC25A12', 'score': 11.53}, {'connected_gene': 'METAP1D', 'score': 11.53}, {'connected_gene': 'HAT1', 'score': 10.97}]