PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000376495	[[23728197, 23731308]]	[[23728386, 23729832]]
NM_001145373	[[23728197, 23731310]]	[[23728386, 23729832]]

Promoter

Chrom	Start	End	Description
chr10	23727926	23727957	CAGE_peak_4_at_OTUD1_5end
chr10	23727966	23727986	CAGE_peak_6_at_OTUD1_5end
chr10	23727989	23728040	CAGE_peak_2_at_OTUD1_5end
chr10	23728041	23728084	CAGE_peak_3_at_OTUD1_5end
chr10	23728215	23728231	CAGE_peak_5_at_OTUD1_5end
chr10	23728380	23728397	CAGE_peak_1_at_OTUD1_5end
chr10	23729243	23729265	CAGE_peak_8_at_OTUD1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I023643	23643209	23643288	0.22	[{'connected_gene': 'KIAA1217', 'score': 10.7}, {'connected_gene': 'OTUD1', 'score': 5.31}, {'connected_gene': 'GC10P023565', 'score': 0.18}]
chr10	GH10I023412	23412082	23412984	1.21	[{'connected_gene': 'C10orf67', 'score': 15.79}, {'connected_gene': 'OTUD1', 'score': 15.46}, {'connected_gene': 'LOC105376453', 'score': 10.86}, {'connected_gene': 'ENSG00000227537', 'score': 9.14}, {'connected_gene': 'MIR1254-2', 'score': 0.37}]
chr10	GH10I023417	23417332	23419101	0.59	[{'connected_gene': 'C10orf67', 'score': 11.13}, {'connected_gene': 'LOC105376453', 'score': 11.12}, {'connected_gene': 'OTUD1', 'score': 0.34}, {'connected_gene': 'MIR1254-2', 'score': 0.34}]
chr10	GH10I023402	23402411	23405971	0.75	[{'connected_gene': 'C10orf67', 'score': 11.13}, {'connected_gene': 'LOC105376453', 'score': 11.11}, {'connected_gene': 'OTUD1', 'score': 11.09}, {'connected_gene': 'ENSG00000227537', 'score': 9.49}, {'connected_gene': 'MIR1254-2', 'score': 0.39}]
chr10	GH10I023433	23433812	23434070	0.49	[{'connected_gene': 'C10orf67', 'score': 11.1}, {'connected_gene': 'LOC105376453', 'score': 11.09}, {'connected_gene': 'OTUD1', 'score': 7.03}, {'connected_gene': 'MIR1254-2', 'score': 0.26}]
chr10	GH10I022738	22738652	22738821	0.73	[{'connected_gene': 'OTUD1', 'score': 20.36}, {'connected_gene': 'PIP4K2A', 'score': 12.44}, {'connected_gene': 'ENSG00000261671', 'score': 11.65}, {'connected_gene': 'COMMD3', 'score': 10.17}, {'connected_gene': 'RNU6-413P', 'score': 0.25}]
chr10	GH10I023511	23511811	23513417	1.38	[{'connected_gene': 'OTUD1', 'score': 18.41}, {'connected_gene': 'C10orf67', 'score': 10.33}, {'connected_gene': 'LOC105376453', 'score': 10.32}, {'connected_gene': 'KIAA1217', 'score': 9.76}, {'connected_gene': 'GC10M023494', 'score': 0.31}, {'connected_gene': 'GC10P023457', 'score': 0.23}]
chr10	GH10I023413	23413506	23414305	1.13	[{'connected_gene': 'OTUD1', 'score': 13.65}, {'connected_gene': 'C10orf67', 'score': 10.72}, {'connected_gene': 'LOC105376453', 'score': 10.71}, {'connected_gene': 'MIR1254-2', 'score': 0.34}]
chr10	GH10I023408	23408458	23409466	0.91	[{'connected_gene': 'OTUD1', 'score': 12.27}, {'connected_gene': 'C10orf67', 'score': 11.47}, {'connected_gene': 'LOC105376453', 'score': 11.47}, {'connected_gene': 'MIR1254-2', 'score': 0.37}]
chr10	GH10I023431	23431855	23433605	1	[{'connected_gene': 'OTUD1', 'score': 16.49}, {'connected_gene': 'C10orf67', 'score': 11.1}, {'connected_gene': 'LOC105376453', 'score': 11.09}, {'connected_gene': 'MIR1254-2', 'score': 0.28}]
chr10	GH10I023448	23448602	23449889	1.13	[{'connected_gene': 'OTUD1', 'score': 12.3}, {'connected_gene': 'C10orf67', 'score': 10.79}, {'connected_gene': 'LOC105376453', 'score': 10.79}, {'connected_gene': 'GC10P023457', 'score': 0.44}, {'connected_gene': 'GC10P023441', 'score': 0.44}]
chr10	GH10I023054	23054993	23056601	1.11	[{'connected_gene': 'OTUD1', 'score': 11.94}, {'connected_gene': 'MSRB2', 'score': 10.98}, {'connected_gene': 'RNA5SP304', 'score': 0.22}]
chr10	GH10I023406	23406673	23406729	0.4	[{'connected_gene': 'OTUD1', 'score': 15.38}, {'connected_gene': 'LOC105376453', 'score': 10.21}, {'connected_gene': 'C10orf67', 'score': 10.21}, {'connected_gene': 'ENSG00000227537', 'score': 9.49}, {'connected_gene': 'MIR1254-2', 'score': 0.39}]
chr10	GH10I023421	23421891	23423373	0.7	[{'connected_gene': 'OTUD1', 'score': 0.37}, {'connected_gene': 'MIR1254-2', 'score': 0.31}]
chr10	GH10I023451	23451401	23452321	0.4	[{'connected_gene': 'OTUD1', 'score': 4.76}, {'connected_gene': 'GC10P023457', 'score': 0.44}, {'connected_gene': 'GC10P023441', 'score': 0.39}]
chr10	GH10I023437	23437692	23442001	1.98	[{'connected_gene': 'OTUD1', 'score': 550.77}, {'connected_gene': 'GC10P023441', 'score': 550.77}]
chr10	GH10I023376	23376130	23376480	0.68	[{'connected_gene': 'LOC105376453', 'score': 11.07}, {'connected_gene': 'C10orf67', 'score': 11.07}, {'connected_gene': 'ENSG00000227537', 'score': 9.41}, {'connected_gene': 'OTUD1', 'score': 5.11}, {'connected_gene': 'MIR1254-2', 'score': 0.37}]
chr10	GH10I023398	23398372	23398521	0.2	[{'connected_gene': 'MIR1254-2', 'score': 0.44}, {'connected_gene': 'OTUD1', 'score': 0.26}]
chr10	GH10I023399	23399145	23401481	0.72	[{'connected_gene': 'MIR1254-2', 'score': 0.44}, {'connected_gene': 'OTUD1', 'score': 0.28}]
chr10	GH10I022821	22821320	22822020	0.82	[{'connected_gene': 'ENSG00000261671', 'score': 22.85}, {'connected_gene': 'OTUD1', 'score': 20.36}, {'connected_gene': 'RNU6-413P', 'score': 11.55}, {'connected_gene': 'BMI1', 'score': 10.43}, {'connected_gene': 'COMMD3', 'score': 10.15}, {'connected_gene': 'LOC105376451', 'score': 0.29}, {'connected_gene': 'GC10P022788', 'score': 0.29}]