PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr9	90589123	90589136	CAGE_peak_8_at_CDK20_5end
chr9	90589138	90589175	CAGE_peak_4_at_CDK20_5end
chr9	90589429	90589488	CAGE_peak_1_at_CDK20_5end
chr9	90589586	90589628	CAGE_peak_2_at_CDK20_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I088004	88004659	88006222	0.31	[{'connected_gene': 'CDK20', 'score': 11.63}, {'connected_gene': 'GC09M088000', 'score': 0.44}, {'connected_gene': 'RNU6-86P', 'score': 0.44}, {'connected_gene': 'RPS10P3', 'score': 0.39}]
chr9	GH09I087984	87984001	87984505	0.31	[{'connected_gene': 'CDK20', 'score': 25.2}, {'connected_gene': 'PIR58182', 'score': 0.44}, {'connected_gene': 'GC09M088000', 'score': 0.39}, {'connected_gene': 'RNU6-86P', 'score': 0.39}, {'connected_gene': 'LOC105376131', 'score': 0.39}]
chr9	GH09I087973	87973446	87975671	1.96	[{'connected_gene': 'CDK20', 'score': 575.89}, {'connected_gene': 'LOC105376131', 'score': 550.77}, {'connected_gene': 'PIR58182', 'score': 550.77}]
chr9	GH09I088773	88773746	88778620	1.55	[{'connected_gene': 'CDK20', 'score': 6.71}, {'connected_gene': 'MIR4289', 'score': 0.29}, {'connected_gene': 'GC09M088841', 'score': 0.2}]
chr9	GH09I087503	87503695	87507055	1.11	[{'connected_gene': 'HNRNPA1P14', 'score': 11.76}, {'connected_gene': 'SPIN1', 'score': 11.1}, {'connected_gene': 'CDK20', 'score': 10.86}, {'connected_gene': 'DAPK1', 'score': 7.18}, {'connected_gene': 'RPS29P18', 'score': 0.37}]
chr9	GH09I087880	87880626	87880904	0.22	[{'connected_gene': 'PIR37243', 'score': 550.77}, {'connected_gene': 'CDK20', 'score': 2.1}, {'connected_gene': 'ENSG00000234460', 'score': 0.37}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000459720	[[90581355, 90582574], [90584108, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589600]]	None
ENST00000603475	[[90581360, 90586250], [90588836, 90589449]]	None
ENST00000336654	[[90581360, 90582574], [90584108, 90584264], [90584710, 90584834], [90585690, 90585812], [90586061, 90586250], [90588836, 90588989], [90589286, 90589504]]	[[90582376, 90582574], [90584108, 90584264], [90584710, 90584834], [90585690, 90585812], [90586061, 90586250], [90588836, 90588989], [90589286, 90589361]]
ENST00000375883	[[90581360, 90582574], [90584108, 90584264], [90584710, 90584834], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589668]]	[[90582376, 90582574], [90584108, 90584264], [90584710, 90584834], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589361]]
ENST00000375871	[[90581364, 90582574], [90584108, 90584264], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589402]]	[[90582498, 90582574], [90584108, 90584264], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589361]]
ENST00000605159	[[90581525, 90582546], [90584108, 90584264], [90584710, 90584834], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589420]]	[[90582498, 90582546], [90584108, 90584264], [90584710, 90584834], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589361]]
ENST00000325303	[[90581548, 90582574], [90584108, 90584264], [90584710, 90584834], [90585482, 90585545], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589667]]	[[90582376, 90582574], [90584108, 90584264], [90584710, 90584834], [90585482, 90585545], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589361]]
ENST00000486228	[[90581796, 90582574], [90584108, 90584264], [90584710, 90584834], [90585482, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589616]]	None
ENST00000604175	[[90585354, 90586250], [90588836, 90588950], [90589286, 90589446]]	None
ENST00000605591	[[90585951, 90586250], [90588836, 90588950], [90589286, 90589446]]	None
NM_178432	[[90581355, 90582574], [90584108, 90584264], [90584710, 90584834], [90585690, 90585812], [90586061, 90586250], [90588836, 90588989], [90589286, 90589695]]	[[90582376, 90582574], [90584108, 90584264], [90584710, 90584834], [90585690, 90585812], [90586061, 90586250], [90588836, 90588989], [90589286, 90589361]]
NM_001039803	[[90581355, 90582574], [90584108, 90584264], [90584710, 90584834], [90585482, 90585545], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589695]]	[[90582376, 90582574], [90584108, 90584264], [90584710, 90584834], [90585482, 90585545], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589361]]
NM_012119	[[90581355, 90582574], [90584108, 90584264], [90584710, 90584834], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589695]]	[[90582376, 90582574], [90584108, 90584264], [90584710, 90584834], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589361]]
NM_001170639	[[90581355, 90582546], [90584108, 90584264], [90584710, 90584834], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589695]]	[[90582498, 90582546], [90584108, 90584264], [90584710, 90584834], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589361]]
NM_001170640	[[90581355, 90582574], [90584108, 90584264], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589695]]	[[90582498, 90582574], [90584108, 90584264], [90585690, 90585812], [90586061, 90586250], [90588836, 90588950], [90589286, 90589361]]