Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000413795 [[101846663, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102511836, 102511923], [102516221, 102517958]] [[101847153, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102511836, 102511884]]
ENST00000369138 [[101846663, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102513671, 102513803], [102516221, 102517958]] [[101847153, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102513671, 102513788]]
ENST00000421544 [[101846663, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102516221, 102517958]] [[101847153, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102516221, 102516386]]
ENST00000358361 [[101846668, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102192473, 102193018]] [[101847153, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102192473, 102192584]]
ENST00000318991 [[101847153, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102511836, 102511884]] [[101847153, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102511836, 102511884]]
ENST00000369137 [[101847153, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337629], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102516221, 102516386]] [[101847153, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337629], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102516221, 102516386]]
ENST00000369134 [[102068020, 102068138], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102516221, 102516496]] [[102069855, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102516221, 102516386]]
ENST00000455610 [[102124643, 102124679], [102130427, 102130481], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307245]] [[102124643, 102124679], [102130427, 102130481], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307245]]
ENST00000436862 [[102266244, 102266358], [102307161, 102307368], [102337514, 102338259]] [[102266244, 102266358], [102307161, 102307368], [102337514, 102337742]]
ENST00000487395 [[102375653, 102376507], [102441053, 102441717]] None
ENST00000487161 [[102376017, 102376507], [102483215, 102483416]] None
NM_021956 [[101846860, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102516221, 102517958]] [[101847153, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102516221, 102516386]]
NM_001166247 [[101846860, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102513671, 102513803], [102516221, 102517958]] [[101847153, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102513671, 102513788]]
NM_175768 [[101846860, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102511836, 102511923], [102516221, 102517958]] [[101847153, 101847268], [102069823, 102069991], [102074254, 102074512], [102124497, 102124679], [102130427, 102130481], [102134054, 102134228], [102247522, 102247666], [102250205, 102250313], [102266244, 102266358], [102307161, 102307368], [102337514, 102337738], [102372475, 102372594], [102376289, 102376507], [102483215, 102483441], [102503204, 102503455], [102511836, 102511884]]
Promoter
Chrom Start End Description
chr6 101846638 101846641 CAGE_peak_18_at_GRIK2_5end
chr6 101846679 101846702 CAGE_peak_1_at_GRIK2_5end
chr6 101846705 101846716 CAGE_peak_4_at_GRIK2_5end
chr6 101846725 101846734 CAGE_peak_17_at_GRIK2_5end
chr6 101846770 101846779 CAGE_peak_7_at_GRIK2_5end
chr6 101846851 101846863 CAGE_peak_6_at_GRIK2_5end
chr6 101846877 101846931 CAGE_peak_2_at_GRIK2_5end
chr6 101846942 101846977 CAGE_peak_3_at_GRIK2_5end
chr6 101847075 101847092 CAGE_peak_5_at_GRIK2_5end
chr6 101847105 101847116 CAGE_peak_13_at_GRIK2_5end
chr6 102517021 102517024 CAGE_peak_10_at_GRIK2_5end

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