PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000359039	[[21329669, 21335379]]	[[21333004, 21334858]]
ENST00000537938	[[21331544, 21334658], [21335095, 21335240]]	[[21333004, 21334654]]
NM_018847	[[21329669, 21335431]]	[[21333004, 21334858]]

Promoter

Chrom	Start	End	Description
chr9	21335339	21335355	CAGE_peak_2_at_KLHL9_5end
chr9	21335356	21335411	CAGE_peak_1_at_KLHL9_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I021989	21989562	21990800	1.16	[{'connected_gene': 'KLHL9', 'score': 19.37}, {'connected_gene': 'CDKN2A-AS1', 'score': 13.13}, {'connected_gene': 'UBA52P6', 'score': 12.6}, {'connected_gene': 'ENSG00000265194', 'score': 12.0}, {'connected_gene': 'MTAP', 'score': 11.15}, {'connected_gene': 'CDKN2B', 'score': 4.93}, {'connected_gene': 'CDKN2B-AS1', 'score': 0.77}, {'connected_gene': 'CDKN2A', 'score': 0.44}, {'connected_gene': 'GC09M021977', 'score': 0.39}, {'connected_gene': 'PIR47863', 'score': 0.39}, {'connected_gene': 'ENSG00000264545', 'score': 0.09}]
chr9	GH09I021326	21326662	21326811	0.6	[{'connected_gene': 'KLHL9', 'score': 0.44}, {'connected_gene': 'IFNA20P', 'score': 0.44}]
chr9	GH09I021334	21334164	21336011	1.94	[{'connected_gene': 'KLHL9', 'score': 550.77}, {'connected_gene': 'IFNA13', 'score': 12.02}, {'connected_gene': 'IFNA5', 'score': 11.16}, {'connected_gene': 'IFNA12P', 'score': 11.08}, {'connected_gene': 'IFNA8', 'score': 11.07}, {'connected_gene': 'IFNWP2', 'score': 11.05}, {'connected_gene': 'IFNA20P', 'score': 0.39}]
chr9	GH09I021333	21333922	21334071	0.2	[{'connected_gene': 'KLHL9', 'score': 550.77}, {'connected_gene': 'IFNA13', 'score': 11.8}, {'connected_gene': 'IFNA5', 'score': 11.16}, {'connected_gene': 'IFNA12P', 'score': 11.08}, {'connected_gene': 'IFNA8', 'score': 11.06}, {'connected_gene': 'IFNWP2', 'score': 11.05}, {'connected_gene': 'IFNA20P', 'score': 0.39}]
chr9	GH09I022208	22208554	22213035	0.96	[{'connected_gene': 'KLHL9', 'score': 20.86}, {'connected_gene': 'ENSG00000265194', 'score': 10.59}, {'connected_gene': 'ENSG00000224549', 'score': 5.29}, {'connected_gene': 'ENSG00000236921', 'score': 0.77}, {'connected_gene': 'GC09M022195', 'score': 0.77}]
chr9	GH09I020619	20619752	20625051	1.99	[{'connected_gene': 'MLLT3', 'score': 556.39}, {'connected_gene': 'KLHL9', 'score': 23.36}, {'connected_gene': 'FOCAD', 'score': 11.63}, {'connected_gene': 'IFNA20P', 'score': 10.09}, {'connected_gene': 'RPL7AP48', 'score': 0.17}]
chr9	GH09I021350	21350946	21351005	0.5	[{'connected_gene': 'IFNA6', 'score': 550.77}, {'connected_gene': 'IFNA12P', 'score': 11.63}, {'connected_gene': 'IFNA8', 'score': 11.62}, {'connected_gene': 'IFNWP2', 'score': 11.6}, {'connected_gene': 'KLHL9', 'score': 0.37}]
chr9	GH09I021653	21653395	21653678	0.33	[{'connected_gene': 'IFNA1', 'score': 16.7}, {'connected_gene': 'IFNA6', 'score': 11.03}, {'connected_gene': 'KLHL9', 'score': 1.41}, {'connected_gene': 'ENSG00000227443', 'score': 0.37}, {'connected_gene': 'KHSRPP1', 'score': 0.26}]
chr9	GH09I022116	22116508	22119608	1.36	[{'connected_gene': 'ENSG00000277653', 'score': 550.77}, {'connected_gene': 'MTAP', 'score': 21.78}, {'connected_gene': 'ENSG00000265194', 'score': 11.94}, {'connected_gene': 'KLHL9', 'score': 11.39}, {'connected_gene': 'CDKN2A', 'score': 10.78}, {'connected_gene': 'CDKN2B-AS1', 'score': 10.78}, {'connected_gene': 'GC09M022195', 'score': 0.17}]