PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000510316	[[73923233, 73925817], [73930508, 73932187], [73936131, 73937249]]	[[73930540, 73932091]]
ENST00000302351	[[73923233, 73925817], [73930508, 73932323], [73936131, 73937249]]	[[73930540, 73932310]]
ENST00000509284	[[73925376, 73925817], [73927957, 73928087]]	None
ENST00000537006	[[73925753, 73925817], [73930508, 73932323], [73936131, 73936254], [73936452, 73936474]]	[[73930540, 73932310]]
ENST00000508331	[[73932161, 73932323], [73933318, 73933443], [73936131, 73937249]]	[[73932161, 73932310]]
ENST00000509127	[[73932298, 73932323], [73933389, 73933526], [73936131, 73936553]]	[[73932298, 73932310]]
NM_001256574	[[73923230, 73925817], [73930508, 73932323], [73933389, 73933526], [73936131, 73937249]]	[[73930540, 73932310]]
NM_001256575	[[73923230, 73925817], [73930508, 73932323], [73933318, 73933443], [73936131, 73937249]]	[[73930540, 73932310]]
NM_003633	[[73923230, 73925817], [73930508, 73932323], [73936131, 73937249]]	[[73930540, 73932310]]
NM_001256576	[[73923230, 73925817], [73930508, 73932187], [73936131, 73937249]]	[[73930540, 73932091]]
NR_046318	[[73923230, 73925817], [73936131, 73937249]]	None

Promoter

Chrom	Start	End	Description
chr5	73932103	73932116	CAGE_peak_24_at_ENC1_5end
chr5	73932119	73932130	CAGE_peak_26_at_ENC1_5end
chr5	73932548	73932552	CAGE_peak_17_at_ENC1_5end
chr5	73936195	73936201	CAGE_peak_19_at_ENC1_5end
chr5	73936230	73936235	CAGE_peak_11_at_ENC1_5end
chr5	73936268	73936275	CAGE_peak_12_at_ENC1_5end
chr5	73936309	73936444	CAGE_peak_2_at_ENC1_5end
chr5	73936451	73936478	CAGE_peak_4_at_ENC1_5end
chr5	73936481	73936505	CAGE_peak_3_at_ENC1_5end
chr5	73936544	73936561	CAGE_peak_1_at_ENC1_5end
chr5	73936575	73936600	CAGE_peak_5_at_ENC1_5end
chr5	73936611	73936621	CAGE_peak_13_at_ENC1_5end
chr5	73936672	73936695	CAGE_peak_6_at_ENC1_5end
chr5	73936738	73936762	CAGE_peak_8_at_ENC1_5end
chr5	73936891	73936919	CAGE_peak_20_at_ENC1_5end
chr5	73936971	73936987	CAGE_peak_21_at_ENC1_5end
chr5	73937062	73937074	CAGE_peak_18_at_ENC1_5end
chr5	73937077	73937094	CAGE_peak_10_at_ENC1_5end
chr5	73937244	73937274	CAGE_peak_7_at_ENC1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I074542	74542254	74545112	1.1	[{'connected_gene': 'ENC1', 'score': 7.96}, {'connected_gene': 'ANKRA2', 'score': 4.98}, {'connected_gene': 'LINC01331', 'score': 0.44}, {'connected_gene': 'HEXB', 'score': 0.15}]
chr5	GH05I074651	74651353	74652634	0.9	[{'connected_gene': 'ENC1', 'score': 27.78}, {'connected_gene': 'POLK', 'score': 5.42}, {'connected_gene': 'HEXB', 'score': 0.39}, {'connected_gene': 'RNU6-658P', 'score': 0.19}, {'connected_gene': 'GC05M074726', 'score': 0.19}]
chr5	GH05I074649	74649556	74649665	0.4	[{'connected_gene': 'ENC1', 'score': 26.05}, {'connected_gene': 'HEXB', 'score': 0.44}, {'connected_gene': 'RNU6-658P', 'score': 0.18}, {'connected_gene': 'GC05M074726', 'score': 0.18}]
chr5	GH05I074648	74648754	74649400	1.15	[{'connected_gene': 'ENC1', 'score': 24.35}, {'connected_gene': 'HEXB', 'score': 0.44}, {'connected_gene': 'RNU6-658P', 'score': 0.18}, {'connected_gene': 'GC05M074726', 'score': 0.18}]
chr5	GH05I074660	74660905	74661256	0.58	[{'connected_gene': 'ENC1', 'score': 0.37}, {'connected_gene': 'HEXB', 'score': 0.34}, {'connected_gene': 'RNU6-658P', 'score': 0.21}, {'connected_gene': 'GC05M074726', 'score': 0.21}]
chr5	GH05I074611	74611331	74612893	0.31	[{'connected_gene': 'ENC1', 'score': 34.14}, {'connected_gene': 'HEXB', 'score': 0.31}, {'connected_gene': 'LINC01331', 'score': 0.18}]
chr5	GH05I074621	74621899	74623259	0.74	[{'connected_gene': 'ENC1', 'score': 39.56}, {'connected_gene': 'HEXB', 'score': 0.37}, {'connected_gene': 'LINC01331', 'score': 0.17}]
chr5	GH05I074635	74635473	74644536	2.48	[{'connected_gene': 'ENC1', 'score': 586.69}, {'connected_gene': 'HEXB', 'score': 550.77}, {'connected_gene': 'RPS26P26', 'score': 12.44}, {'connected_gene': 'LINC01331', 'score': 0.15}]
chr5	GH05I074386	74386068	74387831	0.38	[{'connected_gene': 'ENC1', 'score': 4.52}, {'connected_gene': 'LINC01332', 'score': 0.23}, {'connected_gene': 'GC05M074433', 'score': 0.22}, {'connected_gene': 'LINC01331', 'score': 0.1}]
chr5	GH05I074143	74143752	74143965	0.61	[{'connected_gene': 'ENC1', 'score': 3.3}, {'connected_gene': 'LINC02122', 'score': 0.26}, {'connected_gene': 'LINC01335', 'score': 0.1}]
chr5	GH05I074555	74555075	74557465	0.49	[{'connected_gene': 'ENC1', 'score': 16.42}, {'connected_gene': 'LINC01331', 'score': 0.37}, {'connected_gene': 'HEXB', 'score': 0.18}]
chr5	GH05I074578	74578404	74582480	0.97	[{'connected_gene': 'ENC1', 'score': 6.44}, {'connected_gene': 'LINC01331', 'score': 0.26}, {'connected_gene': 'HEXB', 'score': 0.22}]
chr5	GH05I074575	74575197	74577838	1.01	[{'connected_gene': 'ENC1', 'score': 26.35}, {'connected_gene': 'LINC01331', 'score': 0.28}, {'connected_gene': 'HEXB', 'score': 0.21}]
chr5	GH05I074499	74499062	74503514	1.1	[{'connected_gene': 'ENC1', 'score': 15.3}, {'connected_gene': 'LINC01331', 'score': 0.28}, {'connected_gene': 'GC05P074447', 'score': 0.23}]
chr5	GH05I074491	74491312	74492543	0.46	[{'connected_gene': 'ENC1', 'score': 5.66}, {'connected_gene': 'GC05P074447', 'score': 0.26}, {'connected_gene': 'LINC01331', 'score': 0.25}]
chr5	GH05I074624	74624041	74634151	1.71	[{'connected_gene': 'ENC1', 'score': 39.66}, {'connected_gene': 'ENSG00000272040', 'score': 12.81}, {'connected_gene': 'RPS26P26', 'score': 11.51}, {'connected_gene': 'FAM169A', 'score': 2.11}, {'connected_gene': 'HEXB', 'score': 0.39}, {'connected_gene': 'LINC01331', 'score': 0.16}]
chr5	GH05I074676	74676737	74677765	0.43	[{'connected_gene': 'HEXB', 'score': 6.69}, {'connected_gene': 'ENC1', 'score': 0.28}, {'connected_gene': 'RNU6-658P', 'score': 0.25}, {'connected_gene': 'GC05M074726', 'score': 0.25}]
chr5	GH05I074682	74682985	74683811	0.31	[{'connected_gene': 'HEXB', 'score': 7.88}, {'connected_gene': 'RNU6-658P', 'score': 0.26}, {'connected_gene': 'GC05M074726', 'score': 0.26}, {'connected_gene': 'ENC1', 'score': 0.26}]
chr5	GH05I074684	74684243	74687892	2.23	[{'connected_gene': 'HEXB', 'score': 559.9}, {'connected_gene': 'ENSG00000272040', 'score': 12.78}, {'connected_gene': 'RNU6-658P', 'score': 11.07}, {'connected_gene': 'RNU6-1330P', 'score': 11.07}, {'connected_gene': 'FAM169A', 'score': 10.2}, {'connected_gene': 'GC05M074726', 'score': 0.28}, {'connected_gene': 'ENC1', 'score': 0.26}]
chr5	GH05I074669	74669864	74670254	0.33	[{'connected_gene': 'RNU6-658P', 'score': 10.37}, {'connected_gene': 'ENC1', 'score': 0.31}, {'connected_gene': 'HEXB', 'score': 0.29}, {'connected_gene': 'GC05M074726', 'score': 0.22}]
chr5	GH05I074724	74724813	74725180	0.25	[{'connected_gene': 'RNU6-658P', 'score': 550.77}, {'connected_gene': 'GC05M074726', 'score': 550.77}, {'connected_gene': 'GFM2', 'score': 0.26}, {'connected_gene': 'ENC1', 'score': 0.18}]
chr5	GH05I074537	74537533	74539065	1.1	[{'connected_gene': 'LINC01331', 'score': 550.77}, {'connected_gene': 'ENC1', 'score': 15.83}, {'connected_gene': 'ANKRA2', 'score': 5.27}, {'connected_gene': 'HEXB', 'score': 0.15}]
chr5	GH05I074672	74672985	74673813	0.87	[{'connected_gene': 'NSA2', 'score': 16.77}, {'connected_gene': 'RNU6-658P', 'score': 10.28}, {'connected_gene': 'HEXB', 'score': 6.19}, {'connected_gene': 'ENC1', 'score': 0.29}, {'connected_gene': 'GC05M074726', 'score': 0.23}]
chr5	GH05I074404	74404635	74410383	1.25	[{'connected_gene': 'LINC01333', 'score': 6.07}, {'connected_gene': 'BTF3', 'score': 5.98}, {'connected_gene': 'ENC1', 'score': 4.48}, {'connected_gene': 'GC05M074433', 'score': 0.28}, {'connected_gene': 'LINC01332', 'score': 0.19}, {'connected_gene': 'LINC01331', 'score': 0.13}]