PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000370981	[[68511644, 68513045], [68516230, 68516481], [68516566, 68516680], [68517107, 68517314]]	[[68512290, 68512980]]
ENST00000395201	[[68511646, 68513045], [68516230, 68516460]]	[[68512290, 68512980]]
NM_004675	[[68511644, 68513045], [68516230, 68516481], [68516566, 68516680], [68517107, 68517314]]	[[68512290, 68512980]]

Promoter

Chrom	Start	End	Description
chr1	68513698	68513702	CAGE_peak_5_at_DIRAS3_5end
chr1	68516268	68516294	CAGE_peak_2_at_DIRAS3_5end
chr1	68516298	68516336	CAGE_peak_1_at_DIRAS3_5end
chr1	68516345	68516360	CAGE_peak_4_at_DIRAS3_5end
chr1	68516361	68516380	CAGE_peak_3_at_DIRAS3_5end
chr1	68516393	68516402	CAGE_peak_6_at_DIRAS3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I068049	68049925	68051847	1.65	[{'connected_gene': 'DIRAS3', 'score': 561.64}, {'connected_gene': 'ARL5AP3', 'score': 550.77}, {'connected_gene': 'GC01M068050', 'score': 0.31}, {'connected_gene': 'GNG12-AS1', 'score': 0.08}]
chr1	GH01I067625	67625643	67635800	1.46	[{'connected_gene': 'MIER1', 'score': 13.81}, {'connected_gene': 'GADD45A', 'score': 11.63}, {'connected_gene': 'SERBP1', 'score': 11.16}, {'connected_gene': 'RNU6-1031P', 'score': 10.09}, {'connected_gene': 'CTBP2P8', 'score': 9.98}, {'connected_gene': 'DIRAS3', 'score': 6.15}, {'connected_gene': 'RN7SL392P', 'score': 0.31}, {'connected_gene': 'LOC105378780', 'score': 0.2}]
chr1	GH01I067824	67824419	67825678	0.66	[{'connected_gene': 'GNG12', 'score': 11.97}, {'connected_gene': 'DIRAS3', 'score': 5.78}, {'connected_gene': 'GNG12-AS1', 'score': 0.44}, {'connected_gene': 'RNU7-80P', 'score': 0.23}]
chr1	GH01I067822	67822478	67824237	0.38	[{'connected_gene': 'GNG12', 'score': 11.96}, {'connected_gene': 'DIRAS3', 'score': 4.73}, {'connected_gene': 'GNG12-AS1', 'score': 0.44}, {'connected_gene': 'RNU7-80P', 'score': 0.23}]
chr1	GH01I067826	67826781	67829179	0.83	[{'connected_gene': 'GNG12', 'score': 11.86}, {'connected_gene': 'DIRAS3', 'score': 4.64}, {'connected_gene': 'GNG12-AS1', 'score': 0.77}, {'connected_gene': 'RNU7-80P', 'score': 0.22}]
chr1	GH01I067887	67887814	67891367	1.32	[{'connected_gene': 'GNG12', 'score': 23.24}, {'connected_gene': 'GNG12-AS1', 'score': 10.57}, {'connected_gene': 'DIRAS3', 'score': 4.68}, {'connected_gene': 'LOC100133029', 'score': 0.1}]
chr1	GH01I067801	67801189	67805831	1.05	[{'connected_gene': 'GNG12', 'score': 26.13}, {'connected_gene': 'GNG12-AS1', 'score': 11.73}, {'connected_gene': 'RNU7-80P', 'score': 11.36}, {'connected_gene': 'RNU6-1031P', 'score': 9.95}, {'connected_gene': 'DIRAS3', 'score': 5.44}]
chr1	GH01I067811	67811531	67819992	1.18	[{'connected_gene': 'GNG12', 'score': 14.55}, {'connected_gene': 'RNU7-80P', 'score': 11.21}, {'connected_gene': 'DIRAS3', 'score': 5.72}, {'connected_gene': 'GNG12-AS1', 'score': 0.37}]
chr1	GH01I067790	67790167	67795393	1.78	[{'connected_gene': 'GNG12', 'score': 575.62}, {'connected_gene': 'RNU7-80P', 'score': 12.65}, {'connected_gene': 'GNG12-AS1', 'score': 11.85}, {'connected_gene': 'DIRAS3', 'score': 4.52}]
chr1	GH01I068022	68022596	68022711	0.39	[{'connected_gene': 'ARL5AP3', 'score': 11.67}, {'connected_gene': 'DIRAS3', 'score': 11.67}, {'connected_gene': 'LOC100133029', 'score': 0.34}, {'connected_gene': 'GNG12', 'score': 0.09}, {'connected_gene': 'GNG12-AS1', 'score': 0.08}]
chr1	GH01I067773	67773171	67775006	0.31	[{'connected_gene': 'GC01M067773', 'score': 550.77}, {'connected_gene': 'RNU7-80P', 'score': 550.77}, {'connected_gene': 'DIRAS3', 'score': 5.79}, {'connected_gene': 'GNG12', 'score': 5.19}, {'connected_gene': 'LOC105378781', 'score': 0.34}, {'connected_gene': 'GNG12-AS1', 'score': 0.22}]